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          • Home
          • › Search Tool
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          • › Rn01532127_g1
          See other POU5F1 GE Assays ›
          Gene Symbol:
          Pou5f1
          Gene Name:
          POU class 5 homeobox 1
          Gene Aliases:
          -
          Chromosome Location:
          Chr.20: 3747231 - 3751994 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01532127_g1
          Size
          Availability Made To Order
          Catalog # 4351372
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Pou5f1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001009178.2 NP_001009178.1 1 - 2 465 67
          GenBank mRNA BC158566.1 - 1 - 2 465 67

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC2000001054.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Detect Genomic DNA Rattus norvegicus Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Pou5f1

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          mesodermal cell fate commitment
          endodermal cell fate commitment
          ectodermal cell fate commitment
          endodermal cell fate specification
          trophectodermal cell differentiation
          blastocyst growth
          BMP signaling pathway involved in heart induction
          regulation of transcription, DNA-templated
          transcription by RNA polymerase II
          response to wounding
          regulation of asymmetric cell division
          response to organic substance
          regulation of gene expression
          stem cell population maintenance
          germ-line stem cell population maintenance
          response to retinoic acid
          response to cytokine
          somatic stem cell population maintenance
          mRNA transcription by RNA polymerase II
          cell fate commitment
          negative regulation of cell differentiation
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          negative regulation of calcium ion-dependent exocytosis
          stem cell differentiation
          positive regulation of protein kinase B signaling
          negative regulation of protein kinase B signaling
          positive regulation of SMAD protein signal transduction
          cell fate commitment involved in formation of primary germ layer
          cardiac cell fate determination
          negative regulation of gene silencing by miRNA
          regulation of heart induction by regulation of canonical Wnt signaling pathway
          positive regulation of canonical Wnt signaling pathway
          regulation of DNA methylation-dependent heterochromatin assembly
          transcription cis-regulatory region binding
          RNA polymerase II cis-regulatory region sequence-specific DNA binding
          DNA-binding transcription factor activity, RNA polymerase II-specific
          DNA binding
          chromatin binding
          DNA-binding transcription factor activity
          transcription coactivator activity
          transcription corepressor activity
          RNA binding
          protein binding
          transcription factor binding
          ubiquitin protein ligase binding
          miRNA binding
          sequence-specific DNA binding
          protein heterodimerization activity
          POU domain binding
          HMG box domain binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Clariom S Assay PSR2000008540.rn.1 TC2000001054.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR2000008539.rn.1 TC2000001054.rn.1 RTA TC

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