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- Gene Symbol:
-
Rap1a - Gene Name:
- RAP1A, member of RAS oncogene family
- Gene Aliases:
- RAP-1A, rap 1A
- Chromosome Location:
- Chr.2: 208193948 - 208271922 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Rap1a | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001005765.1 | NP_001005765.1 | 5 - 6 | 436 | 139 | |
| XM_006233076.1 | XP_006233138.1 | 3 - 4 | 277 | 139 | ||
| GenBank mRNA | BC083813.1 | - | 5 - 6 | 436 | 139 | |
| FQ233812.1 | - | 4 - 5 | 342 | 139 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0200004402.rn.1Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
Mammalian Gene Collection
Detect Genomic DNA
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
small GTPase mediated signal transduction
metabolic process
positive regulation of neuron projection development
protein transport
microvillus assembly
Rap protein signal transduction
nerve growth factor signaling pathway
positive regulation of protein kinase activity
establishment of endothelial barrier
positive regulation of ERK1 and ERK2 cascade
cellular response to cAMP
regulation of cell junction assembly
cellular response to nerve growth factor stimulus
negative regulation of synaptic vesicle exocytosis
positive regulation of vasculogenesis
GTPase activity
GTP binding
protein-containing complex binding
small GTPase mediated signal transduction
metabolic process
positive regulation of neuron projection development
protein transport
microvillus assembly
Rap protein signal transduction
nerve growth factor signaling pathway
positive regulation of protein kinase activity
establishment of endothelial barrier
positive regulation of ERK1 and ERK2 cascade
cellular response to cAMP
regulation of cell junction assembly
cellular response to nerve growth factor stimulus
negative regulation of synaptic vesicle exocytosis
positive regulation of vasculogenesis
GTPase activity
GTP binding
protein-containing complex binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P807849 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_42_P708873 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 916503 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 818652 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 268741 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 309178 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 213683 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 242033 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 489420 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 874774 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 594558 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 900490 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 823225 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 197234 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 275015 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 494136 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 944171 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 663111 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 390360 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 722231 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 146311 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 70678 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 243483 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 404599 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 333111 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 928650 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 353010 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 652655 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 186741 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 856503 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 396 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 208971 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 31298 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 437810 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 394626 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 509677 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 850894 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 679847 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 435456 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 127211 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 484923 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 413616 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 13920 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 112640 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 435513 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 108298 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 812539 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 861503 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 562483 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 822301 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 365169 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 669487 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 68151 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 288359 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 680466 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 143859 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 724020 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 337264 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 713458 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 662606 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 97302 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 605288 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 323623 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 160031 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 921326 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 704210 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 20119 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 156726 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 57287 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 13257 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 149659 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 123868 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 138872 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P807849 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_42_P708873 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_42_P708873 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P807849 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P807849 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_42_P708873 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P340852 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P807849 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P301812 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 35894 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 70858 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 18164 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 79857 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 58125 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10825729 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10825731 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10825732 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10825728 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10825730 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10825727 | - | - |
| Rat Genome 230 2.0 Array | 1388615_at | - | - |
| Rat Genome 230 2.0 Array | 1388615_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1390201_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1390201_at | - | - |
| Affymetrix HT Rat Focus Array | 1390201_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1388615_at | - | - |
| Affymetrix HT Rat Focus Array | 1388615_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1390201_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0200030385.rn.1 | TC0200004402.rn.1 | RTA TC |
| Rat Expression Set 230 | 1390201_at | - | - |
| Rat Expression Set 230 | 1388615_at | - | - |
| Rat Expression Set 230 | 1388615_PM_at | - | - |
| Rat Expression Set 230 | 1390201_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10825727 | - | - |
| Rat Genome U34 Set | rc_AA943817_at | - | - |
| Rat Genome U34 Set | rc_AA925664_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21236225 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1363284 | - | - |
| RatRef-12 Expression BeadChip | ILMN_48993 | - | - |
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