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          • Home
          • › Search Tool
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          • › Rn01535167_g1
          See other HMGB2 GE Assays ›
          Gene Symbol:
          Hmgb2 Hmgb2l1 RGD1559962
          Gene Name:
          high mobility group box 2
          high mobility group box 2-like 1
          similar to High mobility group protein 2 (HMG-2)
          Gene Aliases:
          Hmg2
          RGD1564519
          -
          Chromosome Location:
          Chr.16: 36077617 - 36080191 on Build Rnor_6.0
          Chromosome Location:
          Chr.11: 49708042 - 49709128 on Build Rnor_6.0
          Chromosome Location:
          Chr.1: 20416742 - 20419141 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          -
          -
          Assay ID Rn01535167_g1
          Size
          Availability Made To Order
          Catalog # 4351372
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Hmgb2
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_017187.2 NP_058883.1 3 - 4 450 66
          GenBank mRNA BC078866.1 - 2 - 3 308 66
          BC089854.1 - 3 - 4 450 66
          BC107455.1 - 3 - 4 479 66
          D84418.1 - 3 - 4 372 66
          FQ225084.1 - 3 - 4 414 66
          FQ229618.1 - 3 - 4 387 66
          FQ230440.1 - 3 - 4 66
          FQ233747.1 - 3 - 4 388 66
          Gene Symbol: Hmgb2l1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq XM_573272.5 XP_573272.3 1 387 66
          Gene Symbol: RGD1559962
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq XM_008758645.1 XP_008756867.1 1 1802 66

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1600001549.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 3' Most Mammalian Gene Collection Detect Genomic DNA Rattus norvegicus Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Hmgb2
          Click here to find siRNAs for Gene Hmgb2l1
          Click here to find siRNAs for Gene RGD1559962

          Gene Ontology Categories:

          Function(s) Process(es)

          positive regulation of endothelial cell proliferation
          base-excision repair, DNA ligation
          chromatin remodeling
          regulation of transcription by RNA polymerase II
          spermatogenesis
          spermatid nucleus differentiation
          nervous system development
          male gonad development
          animal organ regeneration
          positive regulation of nuclease activity
          positive regulation of DNA binding
          positive regulation of erythrocyte differentiation
          positive regulation of megakaryocyte differentiation
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          response to steroid hormone
          positive chemotaxis
          positive regulation of DNA metabolic process
          cell chemotaxis
          cellular response to lipopolysaccharide
          negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
          biological_process
          regulation of transcription, DNA-templated
          transcription cis-regulatory region binding
          DNA binding
          damaged DNA binding
          double-stranded DNA binding
          DNA-binding transcription factor activity
          RNA binding
          lipid binding
          DNA binding, bending
          protein domain specific binding
          nucleosomal histone binding
          chemoattractant activity
          RAGE receptor binding
          molecular_function
          chromatin binding

          MicroArray Probes:

          Affymetrix Illumina

          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Clariom S Assay PSR1600011808.rn.1 TC1600001549.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1600011809.rn.1 TC1600001549.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1600011812.rn.1 TC1600001549.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1600011814.rn.1 TC1600001549.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1600011806.rn.1 TC1600001549.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1600011811.rn.1 TC1600001549.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1600011816.rn.1 TC1600001549.rn.1 RTA TC
          Rat Genome U34 Set rc_AI008836_s_at - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1357050 - -
          RatRef-12 Expression BeadChip ILMN_68433 - -

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