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- Gene Symbol:
-
LOC100912163Arid4b - Gene Name:
- AT-rich interactive domain-containing protein 4B-like
- AT rich interactive domain 4B (Rbp1 like)
- Gene Aliases:
- -
- Bcaa
- Chromosome Location:
- Chr.17: 53629443 - 53741761 on Build Rnor_6.0
- Chromosome Location:
- Chr.17: 53831353 - 53955920 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: LOC100912163 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | XM_008771836.1 | XP_008770058.1 | 22 - 23 | 3943 | 90 | |
| Gene Symbol: Arid4b | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_053421.1 | NP_445873.1 | 21 - 22 | 3600 | 90 | |
| XM_006254016.2 | XP_006254078.1 | 23 - 24 | 4183 | 90 | ||
| XM_006254019.2 | XP_006254081.1 | 22 - 23 | 3922 | 90 | ||
| XM_008771764.1 | XP_008769986.1 | 23 - 24 | 4198 | 90 | ||
| XM_008771765.1 | XP_008769987.1 | 23 - 24 | 4090 | 90 | ||
| XM_008771766.1 | XP_008769988.1 | 22 - 23 | 3937 | 90 | ||
| GenBank mRNA | AF245512.1 | - | 21 - 22 | 3600 | 90 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC1700001922.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
3' Most
Rattus norvegicus
1700
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
regulation of gene expression by genetic imprinting
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription by RNA polymerase II
spermatogenesis
histone H4-K20 trimethylation
histone H3-K9 trimethylation
positive regulation of transcription by RNA polymerase II
establishment of Sertoli cell barrier
transcription cis-regulatory region binding
DNA binding
regulation of gene expression by genetic imprinting
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription by RNA polymerase II
spermatogenesis
histone H4-K20 trimethylation
histone H3-K9 trimethylation
positive regulation of transcription by RNA polymerase II
establishment of Sertoli cell barrier
transcription cis-regulatory region binding
DNA binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_43_P12803 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P247966 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 125480 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 759638 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 397810 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 38464 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 318143 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 13957 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 905386 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 96313 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 737694 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 120995 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 490869 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 834312 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 780127 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 572825 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 608325 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 34867 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 35041 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 506804 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 796121 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 552001 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 32138 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 98387 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 183155 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 87585 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 338013 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 468975 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 294922 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 561150 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 911879 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 542868 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 659736 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 179189 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 878815 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 550698 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 861819 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 50668 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 404495 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 959963 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 486547 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 764543 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 508685 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 936956 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 916868 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 203002 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 220222 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 951962 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 97435 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 850330 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 644151 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 445350 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 583315 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 506799 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 180723 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 46238 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 711164 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 215729 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 684461 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 359501 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 638890 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 79702 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 887180 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 116452 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 944095 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 757114 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 200792 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 823766 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 688289 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 209928 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 618823 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 957378 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 429179 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 355388 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 298730 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 349969 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 373755 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 197456 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 43740 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 586003 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 357854 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 97655 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 587716 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 798201 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 93466 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 40907 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 136273 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 28660 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 62280 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 103318 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 47799 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 8048 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 100045 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 75852 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 163206 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 12323 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 35458 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 155059 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 167326 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P247966 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P12803 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P12803 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P247966 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P247966 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_43_P12803 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P12803 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700695689 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700244762 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 55121 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 62820 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 80127 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 59214 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 76870 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 62285 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 45108 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 86493 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 42742 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 66271 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700695689 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700244762 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10798757 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798746 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798761 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798740 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798739 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798742 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798738 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798743 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798760 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798745 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798755 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798751 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798754 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798763 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798758 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798759 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798762 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798753 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798750 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798749 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798741 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798756 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798752 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10798737 | - | - |
| Rat Genome 230 2.0 Array | 1368837_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1368837_at | - | - |
| Affymetrix HT Rat Focus Array | 1368837_at | - | - |
| Affymetrix HT Rat Focus Array | 1368837_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR1700012957.rn.1 | TC1700001922.rn.1 | RTA TC |
| Rat Expression Set 230 | 1368837_at | - | - |
| Rat Expression Set 230 | 1368837_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10798737 | - | - |
| Rat Genome U34 Set | rc_AA955478_at | - | - |
| Rat Genome U34 Set | rc_AI102488_at | - | - |
| Rat Genome U34 Set | rc_AI136605_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 22346107 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1354974 | - | - |
| RatRef-12 Expression BeadChip | ILMN_57097 | - | - |
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