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- Gene Symbol:
-
Sdc2 - Gene Name:
- syndecan 2
- Gene Aliases:
- HSPG
- Chromosome Location:
- Chr.7: 71572731 - 71686139 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Sdc2 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_013082.3 | NP_037214.1 | 4 - 5 | 817 | 92 | |
| XM_006241518.2 | XP_006241580.1 | 4 - 5 | 1029 | 92 | ||
| GenBank mRNA | BC070890.1 | - | 4 - 5 | 607 | 92 | |
| FQ218442.1 | - | 4 - 5 | 550 | 92 | ||
| FQ219283.1 | - | 4 - 5 | 851 | 92 | ||
| FQ219510.1 | - | 4 - 5 | 849 | 92 | ||
| FQ222974.1 | - | 4 - 5 | 899 | 92 | ||
| M81687.1 | - | 4 - 5 | 817 | 92 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0700000925.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
3' Most
Mammalian Gene Collection
Rattus norvegicus
1700
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_43_P11193 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_43_P11701 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 398226 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 556201 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 505892 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 336931 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 780425 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 675116 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 9218 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 766738 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 788530 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 248356 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 100807 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 348811 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 510649 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 229345 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 83392 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 923220 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 28099 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 36631 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 948497 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 330839 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 550405 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 836641 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 165914 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 699756 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 716344 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 498176 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 96411 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 922186 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 72121 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 165773 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 786532 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 168470 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 419420 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 909923 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 949789 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 266912 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 881212 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 109170 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 829471 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 917335 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 571517 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 506205 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 863652 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 457991 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 49862 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 779693 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 35310 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 703743 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 842128 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 849236 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 961196 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 863459 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 800809 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 556000 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 35097 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 405524 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 904732 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 701458 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 482893 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 334506 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 190593 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 904552 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 961272 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 709103 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 311152 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 703566 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 754142 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 432009 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 163842 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 728384 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 132882 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 793038 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 325181 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 223164 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 780311 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 770947 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 958396 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 348567 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 55711 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 910808 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 146007 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 163382 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 167072 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 27758 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 114167 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 31297 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 30296 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 140262 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 124411 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 152794 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 128735 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 138005 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 128389 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 766 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P11193 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P11701 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P11193 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P11701 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_43_P11193 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_43_P11701 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P11193 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P11701 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700610226 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 6705 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 56097 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 59027 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 8709 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 45626 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 55358 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 80108 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700610226 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10896023 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10896027 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10896026 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10896024 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10896021 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10896025 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10896022 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10896020 | - | - |
| Rat Genome 230 2.0 Array | 1382189_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1370167_at | - | - |
| Rat Genome 230 2.0 Array | 1370167_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1370166_at | - | - |
| Rat Genome 230 2.0 Array | 1370166_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1382189_at | - | - |
| Affymetrix HT Rat Focus Array | 1370166_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1382189_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1370167_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1370166_at | - | - |
| Affymetrix HT Rat Focus Array | 1382189_at | - | - |
| Affymetrix HT Rat Focus Array | 1370167_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0700007071.rn.1 | TC0700000925.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0700007070.rn.1 | TC0700000925.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0700007072.rn.1 | TC0700000925.rn.1 | RTA TC |
| Rat Expression Set 230 | 1370167_at | - | - |
| Rat Expression Set 230 | 1370167_PM_at | - | - |
| Rat Expression Set 230 | 1370166_at | - | - |
| Rat Expression Set 230 | 1370166_PM_at | - | - |
| Rat Expression Set 230 | 1382189_at | - | - |
| Rat Expression Set 230 | 1382189_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10896020 | - | - |
| Rat Genome U34 Set | M81687_at | - | - |
| Rat Genome U34 Set | rc_AI011678_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 20707257 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1361950 | - | - |
| RatRef-12 Expression BeadChip | ILMN_61221 | - | - |
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