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- Gene Symbol:
-
Nr5a2 - Gene Name:
- nuclear receptor subfamily 5, group A, member 2
- Gene Aliases:
- Ftf, Lrh-1
- Chromosome Location:
- Chr.13: 53750470 - 53870287 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Nr5a2 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_021742.1 | NP_068510.1 | 7 - 8 | 1375 | 79 | |
| XM_006249928.2 | XP_006249990.1 | 6 - 7 | 1483 | 79 | ||
| XM_006249929.2 | XP_006249991.1 | 5 - 6 | 1223 | 79 | ||
| GenBank mRNA | AB012960.1 | - | 7 - 8 | 1375 | 79 | |
| AB012961.1 | - | 6 - 7 | 1312 | 79 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC1300001494.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Recommended Assay
Rattus norvegicus
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription by RNA polymerase II
bile acid metabolic process
intracellular receptor signaling pathway
epithelial cell differentiation
regulation of cell population proliferation
cholesterol homeostasis
steroid hormone mediated signaling pathway
positive regulation of viral genome replication
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
pancreas morphogenesis
transcription cis-regulatory region binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA binding
double-stranded DNA binding
DNA-binding transcription factor activity
steroid hormone receptor activity
nuclear receptor activity
phospholipid binding
zinc ion binding
lipid binding
sequence-specific DNA binding
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription by RNA polymerase II
bile acid metabolic process
intracellular receptor signaling pathway
epithelial cell differentiation
regulation of cell population proliferation
cholesterol homeostasis
steroid hormone mediated signaling pathway
positive regulation of viral genome replication
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
pancreas morphogenesis
transcription cis-regulatory region binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA binding
double-stranded DNA binding
DNA-binding transcription factor activity
steroid hormone receptor activity
nuclear receptor activity
phospholipid binding
zinc ion binding
lipid binding
sequence-specific DNA binding
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P009798 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P035940 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 710023 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 1753 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 143681 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 866410 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 895592 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 677558 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 763315 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 717554 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 774400 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 630632 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 908250 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 230829 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 733826 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 581845 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 377161 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 795648 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 582854 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 287325 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 235365 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 15303 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 388600 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 789124 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 902695 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 489471 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 153645 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 373046 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 383026 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 947880 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 620351 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 160541 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 356035 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 516324 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 47205 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 73056 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 759482 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 789311 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 464443 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 135927 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 70574 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 767361 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 794389 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 481881 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 243864 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 835044 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 574165 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 579639 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 178063 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 458056 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 62703 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 691326 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 157297 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 835965 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 962347 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 355785 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 581513 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 327080 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 305653 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 521886 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 17473 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 627143 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 862435 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 944259 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 136679 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 4008 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 846869 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 479670 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 75782 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 321662 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 692624 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 435858 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 816014 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 948203 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 509434 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 553680 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 602621 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 505374 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 78021 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 525803 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 427186 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 442314 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 483984 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 603937 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 363315 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 125930 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 670171 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 835156 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 612414 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 756397 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 766562 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 144934 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 71689 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 68507 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 112278 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 92276 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 34792 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 8212 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 172886 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 27494 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 143160 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 83398 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 29598 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 50103 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 143407 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 49159 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P009798 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P035940 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P009798 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P035940 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P035940 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P009798 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P12110 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 53205 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 35334 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 84638 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 68580 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 31165 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 56827 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 77345 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 1661 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10768123 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10768126 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10768121 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10768127 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10768122 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10768120 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10768117 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10768118 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10768124 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10768125 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10768119 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10768116 | - | - |
| Rat Genome 230 2.0 Array | 1387573_a_at | - | - |
| Rat Genome 230 2.0 Array | 1387573_PM_a_at | - | - |
| Affymetrix HT Rat Focus Array | 1387573_a_at | - | - |
| Affymetrix HT Rat Focus Array | 1387573_PM_a_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR1300010300.rn.1 | TC1300001494.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1300010301.rn.1 | TC1300001494.rn.1 | RTA TC |
| Rat Expression Set 230 | 1387573_a_at | - | - |
| Rat Expression Set 230 | 1387573_PM_a_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10768116 | - | - |
| Rat Genome U34 Set | AB012960_s_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1372043 | - | - |
| RatRef-12 Expression BeadChip | ILMN_66659 | - | - |
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