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          • Home
          • › Search Tool
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          • › Rn01751069_mH
          See other SOX9 GE Assays ›
          Gene Symbol:
          Sox9
          Gene Name:
          SRY (sex determining region Y)-box 9
          Gene Aliases:
          -
          Chromosome Location:
          Chr.10: 101288354 - 101294030 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01751069_mH
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Sox9
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq XM_003750950.3 XP_003750998.1 1 - 2 915 60
          GenBank mRNA AB073720.1 - 1 - 2 383 60
          DN937506.1 - 1 - 2 464 60

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          More Information


          Set Membership:

          Amplicon length less than or equal to 70 Rattus norvegicus 1700 Inventoried Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          skeletal system development
          cartilage condensation
          ossification
          branching involved in ureteric bud morphogenesis
          cell fate specification
          epithelial to mesenchymal transition
          tissue homeostasis
          positive regulation of protein phosphorylation
          hair follicle development
          positive regulation of mesenchymal cell proliferation
          chondrocyte development
          negative regulation of immune system process
          heart valve development
          heart valve morphogenesis
          heart valve formation
          endocardial cushion morphogenesis
          chondrocyte differentiation involved in endochondral bone morphogenesis
          chondrocyte hypertrophy
          nucleosome assembly
          chromatin remodeling
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          regulation of transcription by RNA polymerase II
          transcription by RNA polymerase II
          protein phosphorylation
          cytoskeleton organization
          signal transduction
          epidermal growth factor receptor signaling pathway
          spermatogenesis
          heart development
          positive regulation of cell population proliferation
          negative regulation of cell population proliferation
          male gonad development
          regulation of cell cycle process
          positive regulation of gene expression
          negative regulation of gene expression
          positive regulation of epithelial cell migration
          neural crest cell development
          positive regulation of phosphatidylinositol 3-kinase signaling
          male germ-line sex determination
          cAMP-mediated signaling
          cell differentiation
          regulation of cell adhesion
          extracellular matrix organization
          male sex determination
          negative regulation of ossification
          negative regulation of bone mineralization
          prostate gland development
          negative regulation of epithelial cell differentiation
          positive regulation of epithelial cell differentiation
          mammary gland development
          notochord development
          otic vesicle formation
          endocrine pancreas development
          negative regulation of chondrocyte differentiation
          positive regulation of chondrocyte differentiation
          lacrimal gland development
          protein localization to nucleus
          somatic stem cell population maintenance
          intrahepatic bile duct development
          regulation of cell population proliferation
          regulation of apoptotic process
          negative regulation of apoptotic process
          protein kinase B signaling
          cell fate commitment
          regulation of cell differentiation
          negative regulation of myoblast differentiation
          positive regulation of protein catabolic process
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          negative regulation of photoreceptor cell differentiation
          oligodendrocyte differentiation
          homeostasis of number of cells within a tissue
          positive regulation of epithelial cell proliferation
          negative regulation of epithelial cell proliferation
          cartilage development
          Sertoli cell differentiation
          Sertoli cell development
          astrocyte fate commitment
          retina development in camera-type eye
          limb bud formation
          retinal rod cell differentiation
          endochondral bone morphogenesis
          epithelial tube branching involved in lung morphogenesis
          lung epithelial cell differentiation
          prostate gland morphogenesis
          epithelial cell proliferation involved in prostatic bud elongation
          bronchus cartilage development
          trachea cartilage development
          intestinal epithelial structure maintenance
          regulation of cell proliferation involved in tissue homeostasis
          positive regulation of cartilage development
          regulation of branching involved in lung morphogenesis
          morphogenesis of a branching epithelium
          lung smooth muscle development
          protein-containing complex assembly
          negative regulation of biomineral tissue development
          ERK1 and ERK2 cascade
          Harderian gland development
          cellular response to mechanical stimulus
          cellular response to retinoic acid
          cellular response to interleukin-1
          cellular response to epidermal growth factor stimulus
          cellular response to heparin
          cellular response to transforming growth factor beta stimulus
          renal vesicle induction
          ureter development
          ureter urothelium development
          ureter smooth muscle cell differentiation
          ureter morphogenesis
          metanephric nephron tubule formation
          negative regulation of canonical Wnt signaling pathway
          cochlea morphogenesis
          positive regulation of kidney development
          positive regulation of branching involved in ureteric bud morphogenesis
          cell-cell adhesion
          positive regulation of extracellular matrix assembly
          positive regulation of male gonad development
          positive regulation of cell proliferation involved in heart morphogenesis
          positive regulation of mesenchymal stem cell differentiation
          regulation of epithelial cell proliferation involved in lung morphogenesis
          negative regulation of mesenchymal cell apoptotic process
          transcription cis-regulatory region binding
          DNA-binding transcription factor activity, RNA polymerase II-specific
          cis-regulatory region sequence-specific DNA binding
          core promoter sequence-specific DNA binding
          DNA-binding transcription activator activity, RNA polymerase II-specific
          DNA binding
          chromatin binding
          DNA-binding transcription factor activity
          protein kinase activity
          protein binding
          beta-catenin binding
          protein kinase A catalytic subunit binding
          bHLH transcription factor binding
          sequence-specific DNA binding
          protein heterodimerization activity
          pre-mRNA intronic binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P033298 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P033293 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P033293 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P033293 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P033293 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P745356 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P102481 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P263110 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P221245 - -
          Array Name Probe IDs Targets Target Type
          Rat Genome 230 2.0 Array 1386387_at - -
          Rat Genome 230 2.0 Array 1386387_PM_at - -
          Rat Expression Set 230 1386387_at - -
          Rat Expression Set 230 1386387_PM_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21181500 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1361412 - -
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1650206 - -
          RatRef-12 Expression BeadChip ILMN_55781 - -

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          Host server : magellan-search-6659c69d8f-875ns:80/100.66.130.62:80.
          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.30.1-2025.05.22-1.0