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          • › Search Tool
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          • › Rn01754210_gH
          See other SOX18 GE Assays ›
          Gene Symbol:
          Sox18
          Gene Name:
          SRY (sex determining region Y)-box 18
          Gene Aliases:
          -
          Chromosome Location:
          Chr.3: 177177237 - 177179039 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01754210_gH
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Sox18
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001024781.1 NP_001019952.1 1 - 2 444 55
          GenBank mRNA BC097973.1 - 1 - 2 444 55

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0300005062.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Sox18

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          angiogenesis
          blood vessel development
          vasculogenesis
          in utero embryonic development
          hair follicle development
          vasculature development
          lymph vessel development
          lymphangiogenesis
          regulation of transcription, DNA-templated
          regulation of transcription by RNA polymerase II
          transcription by RNA polymerase II
          heart development
          biological_process
          hair cycle process
          embryonic heart tube development
          mRNA transcription by RNA polymerase II
          blood vessel endothelial cell migration
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          cell maturation
          stem cell fate specification
          endocardium formation
          lymphatic endothelial cell differentiation
          endocardial cell differentiation
          establishment of endothelial barrier
          regulation of stem cell proliferation
          transcription cis-regulatory region binding
          RNA polymerase II cis-regulatory region sequence-specific DNA binding
          DNA-binding transcription factor activity, RNA polymerase II-specific
          molecular_function
          DNA binding
          DNA-binding transcription factor activity
          sequence-specific DNA binding
          protein heterodimerization activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P623913 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 535528 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P623913 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P623913 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P623913 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P623913 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P454913 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 7245 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10852596 - -
          Affymetrix Rat Gene 1.0 ST Array 10852597 - -
          Affymetrix Rat Gene 1.1 ST Array 10852595 - -
          Rat Genome 230 2.0 Array 1381971_at - -
          Rat Genome 230 2.0 Array 1381971_PM_at - -
          Affymetrix HT Rat Focus Array 1381971_PM_at - -
          Affymetrix HT Rat Focus Array 1381971_at - -
          Affymetrix Rat Clariom S Assay PSR0300038554.rn.1 TC0300005062.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0300038555.rn.1 TC0300005062.rn.1 RTA TC
          Rat Expression Set 230 1381971_PM_at - -
          Rat Expression Set 230 1381971_at - -
          Affymetrix Rat Gene 1.0 ST Array 10852595 - -
          Rat Genome U34 Set rc_AI103349_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22395853 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1348946 - -

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          git-commit: d41a97e986437cfbf980934f14197a4b4d3eb741
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