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          • › Rn01770864_m1
          See other NOD2 GE Assays ›
          Gene Symbol:
          Nod2
          Gene Name:
          nucleotide-binding oligomerization domain containing 2
          Gene Aliases:
          Card15
          Chromosome Location:
          Chr.19: 19342061 - 19389365 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01770864_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Nod2
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001106172.1 NP_001099642.1 577 61
          XM_008772370.1 XP_008770592.1 3 - 4 1835 61
          XM_008772371.1 XP_008770593.1 3 - 4 650 61
          XM_008772372.1 XP_008770594.1 3 - 4 1576 61
          XM_008772373.1 XP_008770595.1 3 - 4 627 61

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1900001093.rn.1

          Set Membership:

          Amplicon length less than or equal to 70 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          innate immune response in mucosa
          activation of immune response
          cytokine production involved in immune response
          immunoglobulin production involved in immunoglobulin-mediated immune response
          positive regulation of dendritic cell antigen processing and presentation
          negative regulation of T cell mediated immunity
          positive regulation of dendritic cell cytokine production
          positive regulation of type 2 immune response
          negative regulation of inflammatory response to antigenic stimulus
          positive regulation of humoral immune response mediated by circulating immunoglobulin
          positive regulation of antibacterial peptide biosynthetic process
          positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria
          response to nutrient
          positive regulation of cell population proliferation
          detection of bacterium
          maintenance of gastrointestinal epithelium
          positive regulation of protein ubiquitination
          negative regulation of NF-kappaB transcription factor activity
          response to peptidoglycan
          response to muramyl dipeptide
          response to lipopolysaccharide
          detection of muramyl dipeptide
          negative regulation of interferon-gamma production
          negative regulation of interleukin-12 production
          negative regulation of interleukin-18 production
          negative regulation of interleukin-2 production
          negative regulation of tumor necrosis factor production
          positive regulation of interleukin-1 beta production
          positive regulation of interleukin-10 production
          positive regulation of interleukin-12 production
          positive regulation of interleukin-17 production
          positive regulation of interleukin-6 production
          positive regulation of tumor necrosis factor production
          positive regulation of stress-activated MAPK cascade
          negative regulation of toll-like receptor 2 signaling pathway
          intracellular signal transduction
          defense response to bacterium
          regulation of apoptotic process
          positive regulation of I-kappaB kinase/NF-kappaB signaling
          response to exogenous dsRNA
          positive regulation of MAPK cascade
          positive regulation of phosphatidylinositol 3-kinase activity
          innate immune response
          positive regulation of innate immune response
          positive regulation of Notch signaling pathway
          positive regulation of transcription by RNA polymerase II
          positive regulation of JNK cascade
          positive regulation of epithelial cell proliferation
          regulation of inflammatory response
          positive regulation of peptidyl-tyrosine phosphorylation
          positive regulation of phagocytosis
          defense response to Gram-positive bacterium
          positive regulation of B cell activation
          positive regulation of NF-kappaB transcription factor activity
          positive regulation of oxidoreductase activity
          positive regulation of nitric-oxide synthase biosynthetic process
          positive regulation of prostaglandin-endoperoxide synthase activity
          positive regulation of ERK1 and ERK2 cascade
          nucleotide-binding oligomerization domain containing 2 signaling pathway
          cellular response to peptidoglycan
          cellular response to muramyl dipeptide
          cellular response to organic cyclic compound
          macrophage inflammatory protein-1 alpha production
          regulation of neutrophil chemotaxis
          negative regulation of macrophage apoptotic process
          positive regulation of prostaglandin-E synthase activity
          ATP binding
          enzyme binding
          protein kinase binding
          muramyl dipeptide binding
          peptidoglycan binding
          CARD domain binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P110130 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 308271 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 353345 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 78975 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 791252 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 666858 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 692403 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 752354 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 651478 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 935381 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 369509 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 618088 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 638824 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 752951 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 436812 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 943360 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 41453 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 196466 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 246788 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 550884 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 219830 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 450428 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 612268 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 653403 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 399985 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 916821 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 684093 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 8579 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 103272 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 2450 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 129547 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 94063 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P110130 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P110130 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P110130 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P236563 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 72624 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10809676 - -
          Affymetrix Rat Gene 1.0 ST Array 10809673 - -
          Affymetrix Rat Gene 1.0 ST Array 10809671 - -
          Affymetrix Rat Gene 1.0 ST Array 10809674 - -
          Affymetrix Rat Gene 1.0 ST Array 10809675 - -
          Affymetrix Rat Gene 1.0 ST Array 10809672 - -
          Affymetrix Rat Gene 1.0 ST Array 10809669 - -
          Affymetrix Rat Gene 1.0 ST Array 10809670 - -
          Affymetrix Rat Gene 1.1 ST Array 10809665 - -
          Affymetrix Rat Clariom S Assay PSR1900008787.rn.1 TC1900001093.rn.1 RTA TC
          Affymetrix Rat Gene 1.0 ST Array 10809665 - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 20823102 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1374636 - -

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