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          • › Rn02103824_s1
          See other PROX1 GE Assays ›
          Gene Symbol:
          Prox1
          Gene Name:
          prospero homeobox 1
          Gene Aliases:
          -
          Chromosome Location:
          Chr.13: 108382536 - 108444104 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn02103824_s1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Prox1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001107201.1 NP_001100671.1 5 4072 94
          XM_006250454.2 XP_006250516.1 5 4205 94
          XM_006250455.2 XP_006250517.1 5 3902 94
          XM_006250456.2 XP_006250518.1 5 4524 94
          XM_006250458.2 XP_006250520.1 5 4202 94

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1300001021.rn.1

          Set Membership:

          Amplicon length between 86 and 100 3' Most Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Both primers and probe map within a single exon

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          cell fate determination
          kidney development
          liver development
          positive regulation of endothelial cell proliferation
          lymph vessel development
          lymphangiogenesis
          lens development in camera-type eye
          lens morphogenesis in camera-type eye
          hepatocyte cell migration
          transcription by RNA polymerase II
          brain development
          circadian rhythm
          positive regulation of cell population proliferation
          negative regulation of cell population proliferation
          regulation of gene expression
          positive regulation of endothelial cell migration
          dentate gyrus development
          cerebellar granule cell differentiation
          skeletal muscle thin filament assembly
          lung development
          pancreas development
          response to nutrient levels
          regulation of circadian rhythm
          negative regulation of DNA-binding transcription factor activity
          negative regulation of viral genome replication
          endothelial cell differentiation
          positive regulation of cyclin-dependent protein serine/threonine kinase activity
          positive regulation of cell cycle
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          lens placode formation involved in camera-type eye formation
          inner ear development
          venous blood vessel morphogenesis
          ventricular cardiac myofibril assembly
          atrial cardiac muscle tissue morphogenesis
          ventricular cardiac muscle tissue morphogenesis
          embryonic retina morphogenesis in camera-type eye
          endocardium formation
          positive regulation of sarcomere organization
          ventricular septum morphogenesis
          aorta smooth muscle tissue morphogenesis
          positive regulation of heart growth
          lymphatic endothelial cell differentiation
          branching involved in pancreas morphogenesis
          lens fiber cell morphogenesis
          hepatocyte differentiation
          negative regulation of bile acid biosynthetic process
          hepatocyte proliferation
          acinar cell differentiation
          neuronal stem cell population maintenance
          positive regulation of cell cycle checkpoint
          positive regulation of neural precursor cell proliferation
          positive regulation of forebrain neuron differentiation
          transcription cis-regulatory region binding
          DNA-binding transcription factor activity, RNA polymerase II-specific
          core promoter sequence-specific DNA binding
          molecular_function
          DNA binding
          transcription corepressor activity
          nuclear receptor binding
          sequence-specific DNA binding
          DNA binding domain binding
          LBD domain binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P164271 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P456958 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 723026 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 668907 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 874459 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 241777 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 106191 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 968193 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 336458 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 28098 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 290298 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 931897 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 533271 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 697768 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 358398 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 958319 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 941318 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 743375 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 40402 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 29050 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 192903 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 356899 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 922650 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 271640 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 517564 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 748916 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 224879 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 644923 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 941324 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 323915 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 387525 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 665358 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 320762 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 416138 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 198632 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 927887 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 305348 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 905534 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 637923 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 34272 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 433076 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 388023 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 21278 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 147526 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 139174 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 169256 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 179820 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 91244 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P456958 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P456958 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P456958 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P456958 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 4324 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 1189 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 58798 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10770681 - -
          Affymetrix Rat Gene 1.0 ST Array 10770682 - -
          Affymetrix Rat Gene 1.0 ST Array 10770683 - -
          Affymetrix Rat Gene 1.0 ST Array 10770684 - -
          Affymetrix Rat Gene 1.1 ST Array 10770680 - -
          Rat Genome 230 2.0 Array 1381417_at - -
          Rat Genome 230 2.0 Array 1381417_PM_at - -
          Affymetrix HT Rat Focus Array 1381417_PM_at - -
          Affymetrix HT Rat Focus Array 1381417_at - -
          Affymetrix Rat Clariom S Assay PSR1300007358.rn.1 TC1300001021.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1300007354.rn.1 TC1300001021.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1300007362.rn.1 TC1300001021.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1300007364.rn.1 TC1300001021.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1300007361.rn.1 TC1300001021.rn.1 RTA TC
          Rat Expression Set 230 1381417_PM_at - -
          Rat Expression Set 230 1381417_at - -
          Affymetrix Rat Gene 1.0 ST Array 10770680 - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21531449 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1367963 - -

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