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          • › Rn02106301_s1
          See other ALKBH2 GE Assays ›
          Gene Symbol:
          Alkbh2
          Gene Name:
          alkB, alkylation repair homolog 2 (E. coli)
          Gene Aliases:
          RGD1306377
          Chromosome Location:
          Chr.12: 48257584 - 48262244 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn02106301_s1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Alkbh2
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001126273.1 NP_001119745.1 2 795 112
          XM_006249498.2 XP_006249560.1 3 534 112
          GenBank mRNA BC166547.1 - 2 795 112

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1200000813.rn.1

          Set Membership:

          Amplicon length greater than or equal to 101 Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Both primers and probe map within a single exon

          Gene Ontology Categories:

          Function(s) Process(es)

          DNA dealkylation involved in DNA repair
          oxidative DNA demethylation
          DNA demethylation
          endonuclease activity
          exonuclease activity
          ferrous iron binding
          2-oxoglutarate-dependent dioxygenase activity
          DNA-N1-methyladenine dioxygenase activity
          cytosine C-5 DNA demethylase activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P143507 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 509528 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 533940 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P143507 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P143507 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P143507 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P299659 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10759127 - -
          Affymetrix Rat Gene 1.0 ST Array 10759125 - -
          Affymetrix Rat Gene 1.0 ST Array 10759126 - -
          Affymetrix Rat Gene 1.0 ST Array 10759128 - -
          Affymetrix Rat Gene 1.0 ST Array 10759124 - -
          Affymetrix Rat Gene 1.1 ST Array 10759123 - -
          Rat Genome 230 2.0 Array 1374303_PM_at - -
          Rat Genome 230 2.0 Array 1374303_at - -
          Affymetrix HT Rat Focus Array 1374303_at - -
          Affymetrix HT Rat Focus Array 1374303_PM_at - -
          Affymetrix Rat Clariom S Assay PSR1200007123.rn.1 TC1200000813.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1200007119.rn.1 TC1200000813.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1200007124.rn.1 TC1200000813.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1200007121.rn.1 TC1200000813.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1200007122.rn.1 TC1200000813.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1200007116.rn.1 TC1200000813.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1200007118.rn.1 TC1200000813.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1200007120.rn.1 TC1200000813.rn.1 RTA TC
          Rat Expression Set 230 1374303_PM_at - -
          Rat Expression Set 230 1374303_at - -
          Affymetrix Rat Gene 1.0 ST Array 10759123 - -
          Rat Genome U34 Set rc_H31842_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21933314 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1365422 - -

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