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Gene Symbol:
PAX8-AS1
Gene Name:
Gene Aliases:
Species:
Human
Species Specific ID (Flybase ID):
Assay ID Hs01371028_m1
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Catalog # 4426961
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Assay Details

Gene Symbol: PAX8-AS1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_015377.2 4 - 5 981 122
GenBank mRNA AK001856.1 - 1 - 2 129 122
AK056355.1 - 4 - 5 619 122
AL390179.1 - 1 - 2 139 122
BC036699.2 - 4 - 5 981 122
BX537688.1 - 3 - 4 522 122
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DA166929.1 - 3 - 4 481 Chr. 2 - 113235540 - 113263362 [+] on Build GRCh38 122
GenBankmRNA AU135478.1 - 1 - 2 129 Chr. 2 - 113259462 - 113265992 [+] on Build GRCh38 122
GenBankmRNA BF306670.1 - 1 - 2 138 Chr. 2 - 113259454 - 113265883 [+] on Build GRCh38 122
GenBankmRNA DA463931.1 - 2 - 3 424 Chr. 2 - 113255454 - 113263383 [+] on Build GRCh38 122
GenBankmRNA CD365312.1 - 2 - 3 Chr. 2 - 113259383 - 113265660 [-] on Build GRCh38 122
GenBankmRNA DA376461.1 - 1 - 2 443 Chr. 2 - 113259148 - 113263409 [+] on Build GRCh38 122
GenBankmRNA BX334832.2 - 3 - 4 644 Chr. 2 - 113250766 - 113265597 [+] on Build GRCh38 122
GenBankmRNA BF303926.1 - 137 Chr. - - [-] on Build 122
GenBankmRNA DA552349.1 - 1 - 2 342 Chr. 2 - 113259264 - 113265554 [+] on Build GRCh38 122
GenBankmRNA BX364719.2 - 3 - 4 644 Chr. 2 - 113250766 - 113265623 [+] on Build GRCh38 122
GenBankmRNA DB274922.1 - 3 - 4 431 Chr. 2 - 113235506 - 113263411 [+] on Build GRCh38 122

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream pleckstrin and Sec7 domain containing 4 PSD4 EFA6B,
TIC 		-56.0kb Sense Chr. 2 - 113157399 - 113203229 on NCBI Build GRCh38
Downstream COBW domain containing 2 CBWD2 174.2kb Sense Chr. 2 - 113437691 - 113496204 on NCBI Build GRCh38

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200008957.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02000723.hg.1

Set Membership:

 Amplicon length greater than or equal to 101 3' Most Mammalian Gene Collection Homo sapiens Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina


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