Name: [Hs03298799_sH] [SNORD88A]
Creator: Thermo Fisher Scientific
Keywords: [SNORD88A] Assay, [small nucleolar RNA, C/D box 88A] Assay

Assay Details

Gene Symbol: SNORD88A
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_003067.1		1	44		91

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AW444953.1	-	1			Chr. 19 - 50799437 - 50799864 [+] on Build GRCh38	91
GenBankmRNA	BF511834.1	-	1			Chr. 19 - 50799437 - 50799888 [+] on Build GRCh38	91

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	small nucleolar RNA, C/D box 88B	SNORD88B	HBII-180B	-314.0	Sense	Chr. 19 - 50799029 - 50799125 on NCBI Build GRCh38
Downstream	small nucleolar RNA, C/D box 88C	SNORD88C	HBII-180C	2.8kb	Sense	Chr. 19 - 50802325 - 50802421 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1900011222.hg.1
This assay targets the same location as HTA transcript cluster(s) TC19001756.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Chr array_18 19 21	A_17_P10990638	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990631	-	-
Agilent Whole Chr array_18 19 21	A_17_P31629297	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990643	-	-
Agilent Whole Chr array_18 19 21	A_17_P31629301	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990637	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990641	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990642	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990635	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990632	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990634	-	-
Agilent Whole Chr array_18 19 21	A_17_P17154560	-	-
Agilent Whole Chr array_18 19 21	A_17_P31629299	-	-
Agilent Whole Chr array_18 19 21	A_17_P17154561	-	-
Agilent Whole Chr array_18 19 21	A_17_P31629288	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990636	-	-
Agilent Whole Chr array_18 19 21	A_17_P31629300	-	-
Agilent Whole Chr array_18 19 21	A_17_P17154557	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990640	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990639	-	-
Agilent Whole Chr array_18 19 21	A_17_P17154556	-	-
Agilent Whole Chr array_18 19 21	A_17_P17154558	-	-
Agilent Whole Chr array_18 19 21	A_17_P17154559	-	-
Agilent Whole Chr array_18 19 21	A_17_P31629290	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990633	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P31629288	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10990634	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10990636	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10990640	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P17154558	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10990643	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P17154560	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P31629297	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P17154557	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10990637	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10990642	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P31629299	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990637	-	-
Agilent Whole Chr array_18 19 21	A_17_P17154559	-	-
Agilent Whole Chr array_18 19 21	A_17_P31629301	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990636	-	-
Agilent Whole Chr array_18 19 21	A_17_P31629300	-	-
Agilent Whole Chr array_18 19 21	A_17_P17154560	-	-
Agilent Whole Chr array_18 19 21	A_17_P31629288	-	-
Agilent Whole Chr array_18 19 21	A_17_P17154561	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990631	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990634	-	-
Agilent Whole Chr array_18 19 21	A_17_P31629290	-	-
Agilent Whole Chr array_18 19 21	A_17_P17154556	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990643	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990640	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990633	-	-
Agilent Whole Chr array_18 19 21	A_17_P31629297	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990635	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990632	-	-
Agilent Whole Chr array_18 19 21	A_17_P31629299	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990638	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990642	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990639	-	-
Agilent Whole Chr array_18 19 21	A_17_P17154557	-	-
Agilent Whole Chr array_18 19 21	A_17_P10990641	-	-
Agilent Whole Chr array_18 19 21	A_17_P17154558	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P17154560	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P31629299	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10990643	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P31629297	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10990637	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P17154557	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P17154558	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P31629288	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10990634	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10990642	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10990640	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10990636	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990673	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990659	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990654	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P17154569	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990660	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P17154558	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990671	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990669	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990666	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P17154563	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990639	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990632	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P17154560	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990664	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990667	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990652	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990642	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990656	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990636	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990648	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990650	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P17154537	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990680	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P17154566	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990677	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P17154557	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990641	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990634	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990675	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10990637	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR19023901.hg.1	TC19001756.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19023901.hg.1	ENST00000408314.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023901.hg.1	NR_003067.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011222.hg.1	ENST00000408314.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011222.hg.1	NR_003067.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011222.hg.1	ENST00000408314.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011222.hg.1	NR_003067.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900194303.hg.1	ENST00000408314.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194303.hg.1	NR_003067.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900194303.hg.1	TC1900011222.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900194303.hg.1	NR_003067.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900194303.hg.1	ENST00000408314.1	Ensembl

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Catalog #	4426961
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System Message

Genomic Map