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- Gene Symbol:
-
HPVC1 - Gene Name:
- human papillomavirus (type 18) E5 central sequence-like 1
- Gene Aliases:
- HPV18E5L, PE5L
- Chromosome Location:
- Chr.7: 54201224 - 54202421 on Build GRCh38
- Species:
- Human
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: HPVC1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_004422.2 | 1 | 950 | 136 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | long intergenic non-protein coding RNA 1446 | LINC01446 | GS1-179L18.1 | -389.3kb | Sense | Chr. 7 - 53655509 - 53811931 on NCBI Build GRCh38 |
| Downstream | long intergenic non-protein coding RNA 1445 | LINC01445 | 128.3kb | Anti-sense | Chr. 7 - 54330697 - 54349845 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0700011108.hg.1This assay targets the same location as HTA transcript cluster(s) TC07001393.hg.1
Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3390955 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4319 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4318 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 55843 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3390955 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3390955 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722086 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722096 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498811 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498821 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498812 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722116 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722085 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15943310 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722122 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722118 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722104 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498808 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722089 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498798 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498845 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722079 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15943318 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722087 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498806 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498823 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722119 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15943313 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498816 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722083 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498841 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498809 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498830 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722112 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722110 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498846 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722120 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722100 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722081 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722108 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498840 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722115 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722101 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722126 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498817 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722077 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722118 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498841 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722101 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722086 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498808 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722115 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722100 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498809 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722087 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498830 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15943313 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15943310 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722077 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498821 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498812 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722085 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722083 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498840 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498817 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498845 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722116 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498806 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498811 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722120 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722119 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722122 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722112 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498846 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498816 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722104 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722108 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15943318 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498798 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722081 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722089 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05498823 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722126 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722096 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722110 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25722079 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498801 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498842 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498786 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498791 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498765 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15943313 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15943310 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498817 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498821 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498804 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15943316 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498819 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498811 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498776 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498797 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498818 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498779 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498807 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498799 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498835 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498784 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498768 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498809 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498813 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498823 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498828 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498832 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498770 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498805 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498793 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498812 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498782 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498829 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498780 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498802 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498775 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498825 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498778 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498773 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498800 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498837 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15943309 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15943307 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498840 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498846 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498788 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05498830 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Genome U219 Array | 11757251_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11757251_at | - | - |
| Affymetrix Human Genome U219 Array | 11763947_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11763947_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | TC0700007579.hg.1 | ENST00000629899.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR07021694.hg.1 | NR_004422.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR07021694.hg.1 | TC07001393.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | TC0700007579.hg.1 | ENST00000629899.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0700179473.hg.1 | NR_004422.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0700179473.hg.1 | TC0700011108.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0700179473.hg.1 | NR_004422.2 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A032820 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A032820 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3242847 | NR_004422.2 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3242847 | NR_004422.2 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3242847 | NR_004422.2 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3242847 | NR_004422.2 | human_transcriptome |
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