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Gene Symbol:
PAXIP1-AS1
Gene Name:
Gene Aliases:
Species:
Human
Species Specific ID (Flybase ID):
Assay ID Hs04233436_s1
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Catalog # 4426961
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Assay Details

Gene Symbol: PAXIP1-AS1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_028090.1 1 652 72
GenBank mRNA AK098428.1 - 1 132 72
AL713756.1 - 1 603 72
BC048116.1 - 1 622 72
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA HY006177.1 - 2 410 Chr. 7 - 155003421 - 155004166 [+] on Build GRCh38 72
GenBankmRNA BQ270657.1 - 1 Chr. 7 - 155003995 - 155004595 [-] on Build GRCh38 72
GenBankmRNA DB462802.1 - 2 315 Chr. 7 - 155003461 - 155004220 [+] on Build GRCh38 72
GenBankmRNA BM509013.1 - 1 445 Chr. 7 - 155003647 - 155004176 [+] on Build GRCh38 72
GenBankmRNA BU782933.1 - 1 Chr. 7 - 155004006 - 155004560 [-] on Build GRCh38 72
GenBankmRNA DA009920.1 - 2 397 Chr. 7 - 155003446 - 155004214 [+] on Build GRCh38 72
GenBankmRNA BQ270902.1 - 1 445 Chr. 7 - 155003647 - 155004195 [+] on Build GRCh38 72
GenBankmRNA DR006878.1 - 1 527 Chr. 7 - 155003563 - 155004163 [+] on Build GRCh38 72
GenBankmRNA BM505503.1 - 1 Chr. 7 - 155004031 - 155004597 [-] on Build GRCh38 72
GenBankmRNA BU173275.1 - 82 Chr. 6 - 107871236 - 107872921 [-] on Build GRCh38 72
GenBankmRNA BM505646.1 - 1 Chr. 7 - 155004031 - 155004595 [-] on Build GRCh38 72
GenBankmRNA BI062591.1 - 1 221 Chr. 7 - 155003864 - 155004343 [+] on Build GRCh38 72

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream PAX interacting protein 1 PAXIP1 CAGF28,
CAGF29,
PACIP1,
PAXIP1L,
PTIP,
TNRC2 		-255.0 Anti-sense Chr. 7 - 154943690 - 155003393 on NCBI Build GRCh38
Downstream HTR5A antisense RNA 1 HTR5A-AS1 HTR5AOS 61.4kb Anti-sense Chr. 7 - 155067067 - 155071557 on NCBI Build GRCh38

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700009795.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07001034.hg.1

Set Membership:

 Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Detect Genomic DNA Homo sapiens Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina


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