Name: [Hs04274232_s1] [MGAT4EP]
Creator: Thermo Fisher Scientific
Keywords: [MGAT4EP] Assay, [MGAT4 family member E, pseudogene] Assay

Assay Details

Gene Symbol: MGAT4EP
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038135.2		3	1818		73
GenBank mRNA	BC032956.1	-	3	1815	4827085	73

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DB518250.1	-	1	280	Chr. 1 - 202825945 - 202826371 [+] on Build GRCh38	73
GenBankmRNA	HY214333.1	-	1		Chr. 1 - 202825941 - 202826371 [-] on Build GRCh38	73
GenBankmRNA	DB527564.1	-	1	306	Chr. 1 - 202825919 - 202826371 [+] on Build GRCh38	73

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	prostate cancer associated transcript 6 (non-protein coding)	PCAT6	KDM5B-AS1, KDM5BAS1, PCAN-R1, ncRNA-a2, onco-lncRNA-96	-13.3kb	Sense	Chr. 1 - 202810946 - 202811913 on NCBI Build GRCh38
Downstream	actin pseudogene	LOC148709		34.5kb	Sense	Chr. 1 - 202861754 - 202875241 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100011236.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01001679.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734556	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20795776	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20795770	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15163965	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15163961	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734564	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734551	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734563	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20795784	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20795755	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20795786	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734540	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20795759	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20795766	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734559	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20795760	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734560	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734561	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15163966	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734536	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734565	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15163963	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734543	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734550	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734557	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734537	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00734552	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20795753	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	34105	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	7908866	-	-
Affymetrix Human Gene 1.0 ST Array	7908864	-	-
Affymetrix Human Gene 1.0 ST Array	7908865	-	-
Affymetrix HT HG-U133+ PM Array Plate	1570023_PM_at	-	-
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	ENST00000549576.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01026054.hg.1	ENST00000330493.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01026054.hg.1	ENST00000549576.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01026054.hg.1	NR_038135.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01026054.hg.1	TC01001679.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0100182465.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182465.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182465.hg.1	TC0100011236.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100182465.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182465.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182464.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182464.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182464.hg.1	TC0100011236.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100182464.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182464.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182468.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182468.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182468.hg.1	TC0100011236.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100182468.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182468.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182463.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182463.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182463.hg.1	TC0100011236.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100182463.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182463.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	ENST00000549576.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	TC0100011236.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182466.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182466.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182466.hg.1	TC0100011236.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100182466.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182466.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182467.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182467.hg.1	ENST00000549576.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182467.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182467.hg.1	TC0100011236.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100182467.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182467.hg.1	ENST00000549576.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182467.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182462.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182462.hg.1	NR_038135.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100182462.hg.1	TC0100011236.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100182462.hg.1	ENST00000330493.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100182462.hg.1	NR_038135.2	Refseq
Human Genome U133 Plus 2.0 Array	1570023_at	-	-
Human Genome U133 Plus 2.0 Array	1570023_PM_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570023_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570023_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570023_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570023_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570023_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570023_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570023_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570023_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570023_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570023_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570023_at5	-	-

Availability	Made To Order
Catalog #	4426961
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Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3208464	BC032956.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3208464	NR_038135.1	human_transcriptome

System Message

Genomic Map