Name: [Hs04274368_m1] [LOC643770]
Creator: Thermo Fisher Scientific
Keywords: [LOC643770] Assay, [uncharacterized LOC643770] Assay

Assay Details

Gene Symbol: LOC643770
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038383.1		3 - 4	176		73
GenBank mRNA	AK126817.1	-	3 - 4	176		73

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AI654200.1	-	1 - 2		Chr. 12 - 98486974 - 98503787 [+] on Build GRCh38	73
GenBankmRNA	AI792049.1	-	3 - 4	142	Chr. 12 - 98486986 - 98503820 [-] on Build GRCh38	73
GenBankmRNA	BX111292.1	-	3 - 4	141	Chr. 12 - 98486978 - 98503819 [-] on Build GRCh38	73
GenBankmRNA	AA995901.1	-	1 - 2		Chr. 12 - 98486971 - 98493488 [+] on Build GRCh38	73
GenBankmRNA	AI820655.1	-	1 - 2		Chr. 12 - 98486971 - 98503787 [+] on Build GRCh38	73

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	solute carrier family 9 member 7 pseudogene 1	SLC9A7P1		-28.4kb	Sense	Chr. 12 - 98453840 - 98457145 on NCBI Build GRCh38
Downstream	TMPO antisense RNA 1	TMPO-AS1		19.5kb	Sense	Chr. 12 - 98512973 - 98516226 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200011646.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12001858.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995710	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562344	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562280	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995711	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995668	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562337	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995684	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995713	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995629	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562279	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995626	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995649	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562281	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562335	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562312	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562286	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562313	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562330	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562338	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562300	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995715	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995634	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995653	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995636	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562299	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995672	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995624	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562332	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562307	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995659	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562304	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995656	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995687	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562292	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562321	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995655	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562293	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562331	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562346	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562298	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995639	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562271	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562306	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995660	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995637	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995664	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995709	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995628	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562277	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P16584312	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995712	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562327	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995625	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995683	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562334	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995686	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08562310	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P16584310	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995696	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995692	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P28995651	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	156404	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	719124	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	564768	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	856980	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	610927	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	880119	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	373596	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	209952	CR590757.1	genbank_mrna_human
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	209952	XM_001129364.1	refseq_mrna_human_XM
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	209952	XM_377761.4	refseq_mrna_human_XM
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	209952	XM_928270.2	refseq_mrna_human_XM
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	518907	BC032648.1	genbank_mrna_human
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3309414	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	28366	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P19652659	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P56911032	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3309414	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3309414	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P19652659	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P19652667	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P19652659	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P39786124	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P19652673	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P19652667	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P39786111	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P19652653	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P19652667	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P39786111	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P19652659	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR12024335.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12024335.hg.1	ENST00000549004.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12024335.hg.1	NR_038383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12024335.hg.1	TC12001858.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12024338.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12024338.hg.1	NR_038383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12024338.hg.1	TC12001858.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12024334.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12024334.hg.1	NR_038383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12024334.hg.1	TC12001858.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	ENST00000549004.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	ENST00000549004.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	ENST00000549004.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12024337.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12024337.hg.1	NR_038383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12024337.hg.1	TC12001858.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12024339.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12024339.hg.1	NR_038383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12024339.hg.1	TC12001858.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1200190138.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190138.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190138.hg.1	TC1200011646.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200190138.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190138.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190142.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190142.hg.1	ENST00000549004.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190142.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190142.hg.1	TC1200011646.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200190142.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190142.hg.1	ENST00000549004.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190142.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190137.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190137.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190137.hg.1	TC1200011646.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200190137.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190137.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190141.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190141.hg.1	ENST00000549004.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190141.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190141.hg.1	TC1200011646.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200190141.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190141.hg.1	ENST00000549004.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190141.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190150.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190150.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190150.hg.1	TC1200011646.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200190150.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190150.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190147.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190147.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190147.hg.1	TC1200011646.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200190147.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190147.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	ENST00000549004.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	ENST00000549004.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	ENST00000549004.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	TC1200011646.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190149.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190149.hg.1	NR_038383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200190149.hg.1	TC1200011646.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200190149.hg.1	ENST00000501499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200190149.hg.1	NR_038383.1	Refseq
Human Genome U95 Set	77625_at	-	-
Human Genome U95 Set	77625_PM_at	-	-

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A047923	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A047923	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1752978	NR_038383.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1752978	AK126817.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1752978	NR_038383.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1752978	AK126817.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1752978	NR_038383.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1752978	AK126817.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1752978	NR_038383.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1752978	AK126817.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1752978	NR_038383.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1752978	AK126817.1	human_transcriptome

Availability	Made To Order
Catalog #	4426961
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Genomic Map