Name: [Hs04406596_m1] [C9orf41-AS1]
Creator: Thermo Fisher Scientific
Keywords: [C9orf41-AS1] Assay, [C9orf41 antisense RNA 1] Assay

Assay Details

Gene Symbol: C9orf41-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_121183.1		1 - 2	154		74
GenBank mRNA	BC043649.2	-	1 - 2	150		74
GenBank mRNA	BI552900.1	-	1 - 2	155		74

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DB465744.1	-	1 - 2	143		Chr. 9 - 74952976 - 74991677 [+] on Build GRCh38	74

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	chromosome 9 open reading frame 40	C9orf40		-79.0	Anti-sense	Chr. 9 - 74946583 - 74952886 on NCBI Build GRCh38
Downstream	carnosine N-methyltransferase 1	CARNMT1	C9orf41, UPF0586	5.1kb	Anti-sense	Chr. 9 - 74980794 - 75028456 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900007601.hg.1

Set Membership:

Amplicon length between 71 and 85

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900151379.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151379.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900151379.hg.1	TC0900007601.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900151379.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151379.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900151380.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151380.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900151380.hg.1	TC0900007601.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900151380.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151380.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900151377.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151377.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900151377.hg.1	TC0900007601.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900151377.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151377.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	ENST00000455609.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	NR_121183.1	Refseq
Affymetrix Human Clariom D Assay	TC0900007601.hg.1	NR_121183.1	Refseq

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Catalog #	4426961
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System Message

Genomic Map