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- Gene Symbol:
-
Trex1 - Gene Name:
- three prime repair exonuclease 1
- Gene Aliases:
- 1661, AU041952
- Chromosome Location:
- Chr.9: 109057932 - 109059723 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Trex1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001012236.1 | NP_001012236.1 | 2 | 969 | 123 | |
| NM_011637.6 | NP_035767.4 | 2 | 983 | 123 | ||
| GenBank mRNA | AF151106.3 | - | 2 | 969 | 123 | |
| AF319574.1 | - | 1 | 1683 | 123 | ||
| AK009899.1 | - | 2 | 970 | 123 | ||
| AK087832.1 | - | 2 | 970 | 123 | ||
| AK171916.1 | - | 2 | 958 | 123 | ||
| AU041952.1 | - | 1 | 123 | |||
| BC011133.1 | - | 2 | 990 | 4206812 | 123 | |
| CO041929.1 | - | 1 | 123 | |||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0900003073.mm.1Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
3' Most
Mammalian Gene Collection
Detect Genomic DNA
Recommended Assay
Mus musculus
1700
Inventoried
Both primers and probe map within a single exon
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
DNA catabolic process, exonucleolytic
DNA metabolic process
cellular response to interferon-beta
nucleic acid phosphodiester bond hydrolysis
nucleic acid binding
double-stranded DNA binding
single-stranded DNA binding
nuclease activity
exonuclease activity
protein binding
3'-5'-exodeoxyribonuclease activity
3'-5' exonuclease activity
exodeoxyribonuclease III activity
hydrolase activity
MutLalpha complex binding
MutSalpha complex binding
adenyl deoxyribonucleotide binding
protein homodimerization activity
metal ion binding
DNA catabolic process, exonucleolytic
DNA metabolic process
cellular response to interferon-beta
nucleic acid phosphodiester bond hydrolysis
nucleic acid binding
double-stranded DNA binding
single-stranded DNA binding
nuclease activity
exonuclease activity
protein binding
3'-5'-exodeoxyribonuclease activity
3'-5' exonuclease activity
exodeoxyribonuclease III activity
hydrolase activity
MutLalpha complex binding
MutSalpha complex binding
adenyl deoxyribonucleotide binding
protein homodimerization activity
metal ion binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2073099 | AK009899.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2073099 | AK087832.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2073099 | BC011133.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2073099 | CO041929.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2073099 | NM_001012236.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 328771 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 22446 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 54596 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P132393 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2073099 | AK009899.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2073099 | AK087832.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2073099 | BC011133.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2073099 | CO041929.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2073099 | NM_001012236.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P400166 | AK009899.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P400166 | AK087832.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P400166 | AK171916.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P400166 | BC011133.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P400166 | CO041929.1 | mouse_transcriptome |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26818028 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26818029 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26818023 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26818022 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26818037 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26818034 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26818027 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26818032 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26818025 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26818024 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26818035 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P132393 | - | - |
| Whole Mouse Genome G4122A | A_51_P400166 | AK009899.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P400166 | AK087832.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P400166 | AK171916.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P400166 | BC011133.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P400166 | CO041929.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P103900 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P132393 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P07614115 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P07614111 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P07614090 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817971 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817989 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818022 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818029 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818032 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817976 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818093 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817987 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817996 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817998 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818028 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817972 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817995 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817974 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818102 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818003 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818034 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817983 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817990 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817969 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818095 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817977 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817981 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818096 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818105 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817979 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818009 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817968 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817960 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817985 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818010 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818023 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818027 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817997 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818025 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818104 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818092 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818035 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818001 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817993 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818007 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818101 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818004 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818106 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26817988 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26818099 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P26818022 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P26818028 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P07614076 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P07614066 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P26818023 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P26818032 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P07614081 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P07614113 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P26818037 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P26818025 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10596963 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10596965 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10596966 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10596964 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10596961 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10596962 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1450672_PM_a_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10596960 | - | - |
| Mouse Genome 430 2.0 Array | 1450672_a_at | - | - |
| Mouse Genome 430 2.0 Array | 1459618_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1452408_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1450672_PM_a_at | - | - |
| Mouse Genome 430 2.0 Array | 1459618_at | - | - |
| Mouse Genome 430 2.0 Array | 1452408_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 22040_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 22040_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR0900025875.mm.1 | TC0900003073.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0900025875.mm.1 | NM_001012236.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0900025875.mm.1 | NM_001012236.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0900025875.mm.1 | NM_011637.6.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0900025875.mm.1 | NM_011637.6 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0900025879.mm.1 | TC0900003073.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0900025879.mm.1 | NM_001012236.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0900025879.mm.1 | NM_001012236.1 | Refseq |
| Mouse Expression Set 430 | 1450672_PM_a_at | - | - |
| Mouse Expression Set 430 | 1450672_a_at | - | - |
| Mouse Expression Set 430 | 1452408_at | - | - |
| Mouse Expression Set 430 | 1452408_PM_at | - | - |
| Mouse Expression Set 430 | 1434321_PM_at | - | - |
| Mouse Expression Set 430 | 1434321_at | - | - |
| Murine Genome U74v2 Set | 171062_PM_at | - | - |
| Murine Genome U74v2 Set | 171062_at | - | - |
| Mouse Genome 430A 2.0 Array | 1452408_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1450672_PM_a_at | - | - |
| Mouse Genome 430A 2.0 Array | 1450672_a_at | - | - |
| Mouse Genome 430A 2.0 Array | 1452408_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1450672_PM_a_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1450672_a_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1452408_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1452408_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 928278 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| MouseWG-6 v2 Expression BeadChip | 3450040 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 7100692 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 3450040 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0003450040 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0007100692 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2442241 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2509737 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2509737 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2442241 | - | - |
| mouse-6 v1.1 (Illumina) | scl0003558.1_1-S | - | - |
| mouse-6 v1.1 (Illumina) | scl022040.1_83-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 7100692 | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 3450040 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl022040.1_83-S | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl0003558.1_1-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 3450040 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 7100692 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2509737 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_3131766 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2442241 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_3131766 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2509737 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (3) | scl022040.1_83-S | - | - |
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