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Gene Symbol:
Malat1
Gene Name:
Gene Aliases:
Species:
Mouse
Species Specific ID (Flybase ID):
Assay ID Mm01231526_s1
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Catalog # 4426961
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Assay Details

Gene Symbol: Malat1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_002847.2 1 6806 101
GenBank mRNA EF177380.1 - 1 6806 101
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BB734161.1 - 1 229 Chr. 19 - 5795691 - 5796094 [-] on Build GRCm38 101
GenBankmRNA BF226057.1 - 1 Chr. 19 - 5795689 - 5796150 [+] on Build GRCm38 101
GenBankmRNA BE995883.1 - 1 Chr. 19 - 5795694 - 5795997 [+] on Build GRCm38 101
GenBankmRNA CF982785.1 - 156 Chr. - - [-] on Build 101
GenBankmRNA BB462054.1 - 1 155 Chr. 19 - 5795690 - 5796020 [-] on Build GRCm38 101
GenBankmRNA AY722410.1 - 1 6806 Chr. - - [-] on Build 101
GenBankmRNA BX632354.1 - 1 Chr. 19 - 5795705 - 5795949 [+] on Build GRCm38 101
GenBankmRNA AA060880.1 - 1 397 Chr. 19 - 5795765 - 5796262 [-] on Build GRCm38 101
GenBankmRNA CB319789.1 - 2 461 Chr. 19 - 5795704 - 5797036 [-] on Build GRCm38 101
GenBankmRNA BE687135.1 - 1 Chr. 19 - 5795690 - 5796081 [+] on Build GRCm38 101
GenBankmRNA BE631854.1 - 1 268 Chr. 19 - 5795690 - 5796133 [-] on Build GRCm38 101
GenBankmRNA BE631176.1 - 1 Chr. 19 - 5795690 - 5796115 [+] on Build GRCm38 101
GenBankmRNA AI853644.1 - 1 Chr. 19 - 5795690 - 5796177 [+] on Build GRCm38 101
GenBankmRNA BY537716.1 - 1 249 Chr. 19 - 5795691 - 5796115 [-] on Build GRCm38 101

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream SCY1-like 1 (S. cerevisiae) Scyl1 2810011O19Rik,
C85140,
Ntkl,
mdf,
mfd,
p105 		-24.3kb Sense Chr. 19 - 5758427 - 5771414 on NCBI Build GRCm38
Downstream nuclear paraspeckle assembly transcript 1 (non-protein coding) Neat1 2310043N10Rik,
VINC 		39.6kb Sense Chr. 19 - 5842302 - 5845478 on NCBI Build GRCm38

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1900000984.mm.1

Set Membership:

 Amplicon length greater than or equal to 101 3' Most Detect Genomic DNA Mus musculus 1700 Both primers and probe map within a single exon

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Agilent Affymetrix ABI


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