Name: [Mm01277691_m1] [Nctc1]
Creator: Thermo Fisher Scientific
Keywords: [Nctc1] Assay, [non-coding transcript 1] Assay

Assay Details

Gene Symbol: Nctc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_002452.2		1 - 2	199		83
GenBank mRNA	AI594936.1	-	1 - 2	199		83
	AK035596.1	-	1 - 2	198		83
	AK036720.1	-	1 - 2	199		83

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BB629698.1	-		199		Chr. - - [-] on Build	83
GenBankmRNA	AA062189.1	-	1 - 2	200		Chr. 7 - 142555870 - 142558594 [-] on Build GRCm38	83

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	mitochondrial ribosomal protein L23	Mrpl23	L23mrp, Rpl23, Rpl23l	-14.3kb	Anti-sense	Chr. 7 - 142533030 - 142540747 on NCBI Build GRCm38
Downstream	H19, imprinted maternally expressed transcript	H19	AI747191	16.9kb	Sense	Chr. 7 - 142575532 - 142578146 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700004568.mm.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Mus musculus

1700

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_66_P106095	AK036720.1	mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	154844	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	906977	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	815148	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	786437	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	729511	AK033856.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	729511	AK049048.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	729511	AK049938.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	729511	AK085603.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	729511	AK141578.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	729511	BC093486.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	729511	NM_178768.4	refseq_mrna_mouse_NM
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	6942	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	701429	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	470941	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	861451	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	649530	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	7260	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	83734	-	-
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_66_P106095	AK036720.1	mouse_transcriptome
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_67_P01657693	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_67_P06399594	-	-
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P135090	-	-
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_67_P06399594	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595521	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06576671	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06576665	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595555	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595537	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595507	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595570	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06576645	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595509	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595615	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06029434	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595500	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06576620	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06576617	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595514	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595519	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595558	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06287774	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595591	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595546	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595606	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595533	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595559	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06029436	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595586	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595574	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595577	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595552	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06287773	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595497	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595604	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595505	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595531	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595557	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595566	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595542	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595613	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595503	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06576629	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595593	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595598	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06188367	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06188383	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06251712	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595553	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595539	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595587	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595529	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595618	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595526	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595616	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595496	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595524	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06010118	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595528	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595576	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595565	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06233875	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06287789	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595589	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06251701	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06029450	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595590	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595592	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06576630	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595597	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06010124	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595608	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595594	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595611	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595527	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06576653	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06576636	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595513	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06010119	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595601	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06233877	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06029439	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595536	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595518	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595617	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595549	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595612	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06576675	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595569	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06188378	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595581	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595573	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P25595548	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P06010120	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0700038496.mm.1	TC0700004568.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700038496.mm.1	NR_002452.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700038496.mm.1	NR_002452.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0700038498.mm.1	TC0700004568.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700038498.mm.1	NR_002452.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700038498.mm.1	NR_002452.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0700038499.mm.1	TC0700004568.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700038499.mm.1	NR_002452.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700038499.mm.1	NR_002452.2	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	312133	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina mouse-6 v1.1 expression beadchip	ILMN_2523613	-	-

Availability	Made To Order
Catalog #	4426961
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System Message

Genomic Map