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          • Home
          • › Search Tool
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          • › Mm03936155_s1
          See other KCNQ1OT1 GE Assays ›
          Gene Symbol:
          Kcnq1ot1
          Gene Name:
          KCNQ1 overlapping transcript 1
          Gene Aliases:
          Kvlqt1-as, Lit1, Tssc8
          Chromosome Location:
          Chr.7: 143213111 - 143296547 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm03936155_s1
          Size
          Availability Made To Order
          Catalog # 4426961
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Kcnq1ot1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NR_001461.5 1 81590 98
          GenBank mRNA AK041889.1 - 1 349 98

          Adjacent Gene Details

          Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
          Upstream transient receptor potential cation channel,
          subfamily M,
          member 5
          Trpm5 9430099A16Rik,
          LTrpC-5,
          Ltrpc5,
          Mtr1
          -118.5kb Sense Chr. 7 - 143071529 - 143094642 on NCBI Build GRCm38
          Downstream RIKEN cDNA 4933417O13 gene 4933417O13Rik 107.5kb Sense Chr. 7 - 143322772 - 143330650 on NCBI Build GRCm38

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC0700004580.mm.1

          Set Membership:

          Amplicon length between 86 and 100 3' Most Detect Genomic DNA Mus musculus 1700 Both primers and probe map within a single exon

          Gene Ontology Categories:

          Function(s) Process(es)

          regulation of gene expression by genetic imprinting
          maintenance of DNA methylation
          gene silencing
          hypermethylation of CpG island
          chromatin binding
          protein binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2196922 AK042559.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2196922 NR_001461.5 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2408415 AK054509.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2408415 NR_001461.5 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2408415 AK054509.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2408415 NR_001461.5 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2196922 AK042559.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2196922 NR_001461.5 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P232763 AK039482.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P232763 NR_001461.5 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P534609 AK041889.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P534609 NR_001461.5 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P619388 NR_001461.5 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P618494 AK142427.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P618494 NR_001461.5 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P474551 AK042559.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P474551 NR_001461.5 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P255569 NR_001461.5 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P255569 AK039636.1 mouse_transcriptome
          Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P105212 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix HT MG-430 PM Array Plate 1442029_PM_at - -
          Affymetrix HT MG-430 PM Array Plate 1446255_PM_at - -
          Affymetrix HT MG-430 PM Array Plate 1441588_PM_at - -
          Affymetrix HT MG-430 PM Array Plate 1458161_PM_at - -
          Affymetrix HT MG-430 PM Array Plate 1457781_PM_at - -
          Mouse Genome 430 2.0 Array 1458161_PM_at - -
          Mouse Genome 430 2.0 Array 1446255_at - -
          Mouse Genome 430 2.0 Array 1442029_PM_at - -
          Mouse Genome 430 2.0 Array 1432040_at - -
          Mouse Genome 430 2.0 Array 1446255_PM_at - -
          Mouse Genome 430 2.0 Array 1457781_at - -
          Mouse Genome 430 2.0 Array 1457781_PM_at - -
          Mouse Genome 430 2.0 Array 1446863_at - -
          Mouse Genome 430 2.0 Array 1446863_PM_at - -
          Mouse Genome 430 2.0 Array 1441588_PM_at - -
          Mouse Genome 430 2.0 Array 1442029_at - -
          Mouse Genome 430 2.0 Array 1432040_PM_at - -
          Mouse Genome 430 2.0 Array 1458161_at - -
          Mouse Genome 430 2.0 Array 1441588_at - -
          Affymetrix Mouse Clariom S Array PSR0700038692.mm.1 TC0700004580.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0700038692.mm.1 NR_001461.5.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0700038692.mm.1 NR_001461.5 Refseq
          Mouse Expression Set 430 1441588_PM_at - -
          Mouse Expression Set 430 1458161_at - -
          Mouse Expression Set 430 1457781_at - -
          Mouse Expression Set 430 1442029_PM_at - -
          Mouse Expression Set 430 1446255_at - -
          Mouse Expression Set 430 1442029_at - -
          Mouse Expression Set 430 1457781_PM_at - -
          Mouse Expression Set 430 1446255_PM_at - -
          Mouse Expression Set 430 1458161_PM_at - -
          Mouse Expression Set 430 1441588_at - -
          Murine Genome U74v2 Set 130605_PM_r_at - -
          Murine Genome U74v2 Set 130605_r_at - -
          Affymetrix HT Mouse Genome 430B Array 1446255_at - -
          Affymetrix HT Mouse Genome 430B Array 1442029_at - -
          Affymetrix HT Mouse Genome 430B Array 1458161_PM_at - -
          Affymetrix HT Mouse Genome 430B Array 1441588_at - -
          Affymetrix HT Mouse Genome 430B Array 1457781_at - -
          Affymetrix HT Mouse Genome 430B Array 1458161_at - -
          Affymetrix HT Mouse Genome 430B Array 1441588_PM_at - -
          Affymetrix HT Mouse Genome 430B Array 1457781_PM_at - -
          Affymetrix HT Mouse Genome 430B Array 1446255_PM_at - -
          Affymetrix HT Mouse Genome 430B Array 1442029_PM_at - -
          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 788116 - -
          Array Name Probe IDs Targets Target Type
          Illumina mouse-6 v1.0 expression beadchip 102450541 - -
          Illumina mouse-6 v1.0 expression beadchip 100580398 - -
          Illumina mouse-6 v1.1 expression beadchip ILMN_1256846 - -
          Illumina mouse-6 v1.1 expression beadchip ILMN_1235940 - -
          mouse-6 v1.1 (Illumina) scl30456.3_411-S - -
          Illumina Sentrix mouse-6.v1 bead array 102450541 - -
          Illumina Sentrix mouse-6.v1 bead array 100580398 - -
          Illumina Sentrix Mouse-6 Expression BeadChip (2) 102450541 - -
          Illumina Sentrix Mouse-6 Expression BeadChip (2) 100580398 - -
          Illumina MouseWG-6 v2.0 expression beadchip ILMN_2574839 - -
          Illumina MouseWG-6 v2.0 expression beadchip ILMN_2656568 - -

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