Name: [Mm03949023_m1] [Gm5547]
Creator: Thermo Fisher Scientific
Keywords: [Gm5547] Assay, [predicted gene 5547] Assay

Assay Details

Gene Symbol: Gm5547
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_045845.1		2 - 3	83		79
GenBank mRNA	AK138691.1	-	2 - 3	83		79

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BY724460.1	-	2 - 3	79		Chr. 3 - 105815571 - 105817349 [+] on Build GRCm38	79

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	RAS-related protein-1a	Rap1a	AI848598, G-22K, Krev-1, Rap1	-14.5kb	Anti-sense	Chr. 3 - 105727260 - 105801381 on NCBI Build GRCm38
Downstream	transmembrane and immunoglobulin domain containing 3	Tmigd3	1700001d09rik, 4930578J19Rik	53.5kb	Sense	Chr. 3 - 105870858 - 105924044 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300001095.mm.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Mus musculus

1700

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	561128	-	-
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P708792	BB490675.2	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P708792	AK138691.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P708792	BB490675.2	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P708792	AK138691.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P708792	BB490675.2	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P708792	AK138691.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P708792	BB490675.2	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P708792	AK138691.1	mouse_transcriptome
Agilent Six_ChIP_01_of_03_v2	A_68_P22399378	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02780840	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02610349	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02531741	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399394	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399443	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399383	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399438	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02481604	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02610350	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02610343	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399395	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02531737	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03144697	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399393	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02810408	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399437	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399369	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399447	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399402	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399431	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02947068	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02368339	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02368340	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399445	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399422	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399430	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02956352	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399436	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399459	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399411	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399432	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399453	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399458	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399406	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399471	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02810409	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02780842	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02531743	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399423	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399410	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399425	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02780845	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399407	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02316243	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02857338	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399387	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399371	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02610340	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399427	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399428	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02531744	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399400	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03144700	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02780844	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399403	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399398	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399409	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22399429	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02772911	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02610348	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P02810410	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1446745_PM_at	-	-
Mouse Genome 430 2.0 Array	1446745_at	-	-
Mouse Genome 430 2.0 Array	1446745_PM_at	-	-
Affymetrix GeneChip Mouse Genome 430 2.0 Array	433637_at	-	-
Affymetrix GeneChip Mouse Genome 430 2.0 Array	433637_PM_at	-	-
Affymetrix Mouse Clariom S Array	PSR0300008845.mm.1	TC0300001095.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300008845.mm.1	NR_045845.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300008845.mm.1	NR_045845.1	Refseq
Mouse Expression Set 430	1446745_at	-	-
Mouse Expression Set 430	1446745_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1446745_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1446745_at	-	-

Availability	Made To Order
Catalog #	4426961
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System Message

Genomic Map