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          • Home
          • › Search Tool
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          • › Rn00565157_m1
          See other NEWGENE_2812 GE Assays ›
          Gene Symbol:
          NEWGENE_2812 Hoxa1
          Gene Name:
          homeobox A1
          homeo box A1
          Gene Aliases:
          Hoxa1
          -
          Chromosome Location:
          Chr.4: 82124358 - 82127182 on Build Rnor_6.0
          Chromosome Location:
          Chr.4|NW_007906169: 25763 - 28587 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          -
          Assay ID Rn00565157_m1
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: NEWGENE_2812
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq XM_008762937.1 XP_008761159.1 1 - 2 784 79
          XM_008762938.1 XP_008761160.1 2 - 3 581 79
          Gene Symbol: Hoxa1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_013075.1 NP_037207.1 1 - 2 668 79
          XM_008773708.1 XP_008771930.1 2 - 3 581 79
          GenBank mRNA U93092.1 - 1 - 2 668 79

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          More Information


          Additional Information:

          Based on assay re-evaluation, this assay may detect transcript(s) from off target gene(s). Please contact Tech Support if you need more information.

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 3' Most Detect Genomic DNA Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene NEWGENE_2812
          Click here to find siRNAs for Gene Hoxa1

          Gene Ontology Categories:

          Function(s) Process(es)

          transcription, DNA-templated
          regulation of transcription, DNA-templated
          regulation of transcription by RNA polymerase II
          multicellular organism development
          nervous system development
          sensory perception of sound
          optokinetic behavior
          motor neuron axon guidance
          anatomical structure morphogenesis
          anterior/posterior pattern specification
          rhombomere 3 development
          rhombomere 4 development
          rhombomere 5 development
          abducens nerve formation
          facial nerve structural organization
          facial nucleus development
          central nervous system neuron differentiation
          hindbrain development
          inner ear morphogenesis
          outer ear morphogenesis
          positive regulation of transcription by RNA polymerase II
          anatomical structure formation involved in morphogenesis
          embryonic neurocranium morphogenesis
          inner ear development
          artery morphogenesis
          regulation of behavior
          cognition
          neuromuscular process
          artery development
          semicircular canal formation
          cellular response to retinoic acid
          cochlea development
          cochlea morphogenesis
          sequence-specific DNA binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P099491 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P025276 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 14457 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P099491 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P025276 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P025276 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P099491 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P099491 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P025276 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P243127 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10862544 - -
          Affymetrix Rat Gene 1.0 ST Array 10862542 - -
          Affymetrix Rat Gene 1.0 ST Array 10862546 - -
          Affymetrix Rat Gene 1.0 ST Array 10862545 - -
          Affymetrix Rat Gene 1.1 ST Array 10862541 - -
          Rat Genome 230 2.0 Array 1369544_PM_a_at - -
          Rat Genome 230 2.0 Array 1369544_a_at - -
          Rat Genome 230 2.0 Array 1387612_PM_at - -
          Rat Genome 230 2.0 Array 1387612_at - -
          Affymetrix HT Rat Focus Array 1369544_a_at - -
          Affymetrix HT Rat Focus Array 1387612_at - -
          Affymetrix HT Rat Focus Array 1369544_PM_a_at - -
          Affymetrix HT Rat Focus Array 1387612_PM_at - -
          Rat Expression Set 230 1369544_PM_a_at - -
          Rat Expression Set 230 1387612_at - -
          Rat Expression Set 230 1387612_PM_at - -
          Rat Expression Set 230 1369544_a_at - -
          Affymetrix Rat Gene 1.0 ST Array 10862541 - -
          Rat Genome U34 Set U93092_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 20855961 - -
          ABI Rat Genome Survey Microarray 21568364 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1353666 - -
          RatRef-12 Expression BeadChip ILMN_58191 - -

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          Host server : magellan-search-97865cc7b-9fgnx:80/100.66.128.131:80.
          git-commit: d53bc399386730d6c5c6d01fe94b21e0ad3fdbfa
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.33.0-2025.07.30-1.0