Assay Details

Gene Symbol: Hapln1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019189.2	NP_062062.2	3 - 4	542		67
	XM_006231748.2	XP_006231810.1	3 - 4	743		67
	XM_008760634.1	XP_008758856.1	2 - 3	952		67
GenBank mRNA	BC128740.1	-	3 - 4	542		67

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200000122.rn.1

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

3' Most

Mammalian Gene Collection

Recommended Assay

Rattus norvegicus

1700

Inventoried

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hapln1

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P069729	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P069734	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	908528	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	585959	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	782233	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	180391	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	396467	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	920650	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	323707	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	179766	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	83233	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	282172	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	680780	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	450900	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	496685	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	373380	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	118554	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	727210	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	1324	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	547031	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	886027	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	966622	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	457567	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	56420	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	441164	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	969033	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	956939	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	18954	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	875088	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	764137	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	29469	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	120424	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	45526	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	43987	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	477995	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	631567	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	972761	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	432802	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	505354	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	171816	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	343737	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	788157	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	825503	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	625767	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	185465	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	731578	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	778024	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	724823	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	215957	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	277665	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	953453	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	565791	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	580535	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	165748	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	173620	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	82235	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	20961	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	55859	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	63816	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	131399	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	96617	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P069729	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P069734	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P069729	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P069734	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P069729	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P069734	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P120736	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	39613	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	55293	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	93900	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	69243	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	45381	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	83721	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	54182	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10812401	-	-
Affymetrix Rat Gene 1.0 ST Array	10812405	-	-
Affymetrix Rat Gene 1.0 ST Array	10812400	-	-
Affymetrix Rat Gene 1.0 ST Array	10812403	-	-
Affymetrix Rat Gene 1.0 ST Array	10812404	-	-
Affymetrix Rat Gene 1.0 ST Array	10812406	-	-
Affymetrix Rat Gene 1.1 ST Array	10812399	-	-
Rat Genome 230 2.0 Array	1384541_PM_at	-	-
Rat Genome 230 2.0 Array	1370125_at	-	-
Rat Genome 230 2.0 Array	1384541_at	-	-
Rat Genome 230 2.0 Array	1370125_PM_at	-	-
Affymetrix HT Rat Focus Array	1384541_at	-	-
Affymetrix HT Rat Focus Array	1370125_at	-	-
Affymetrix HT Rat Focus Array	1370125_PM_at	-	-
Affymetrix HT Rat Focus Array	1384541_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200000605.rn.1	TC0200000122.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200000606.rn.1	TC0200000122.rn.1	RTA TC
Rat Expression Set 230	1370125_PM_at	-	-
Rat Expression Set 230	1370125_at	-	-
Rat Expression Set 230	1384541_PM_at	-	-
Rat Expression Set 230	1384541_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10812399	-	-
Rat Genome U34 Set	M22340cds#1_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21070722	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1361552	-	-
RatRef-12 Expression BeadChip	ILMN_67551	-	-

Citations (1)

Regulation of Sox9 activity by crosstalk with nuclear factor-kappaB and retinoic acid receptors.

Authors: Rockel JS, Kudirka JC, Guzi AJ, Bernier SM
Journal: Arthritis Res Ther - Page No R3 (Tue Jan 01 00:00:00 UTC 2008)
Volume (Year): 10 (2008)
Product Usage: -

Availability	Inventoried
Catalog #	4331182
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System Message

Genomic Map