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          • Home
          • › Search Tool
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          • › Rn00579743_m1
          See other PAX8 GE Assays ›
          Gene Symbol:
          Pax8
          Gene Name:
          paired box 8
          Gene Aliases:
          -
          Chromosome Location:
          Chr.3: 1527316 - 1586023 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00579743_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Pax8
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_031141.2 NP_112403.2 11 - 12 1466 64
          XM_006233646.2 XP_006233708.1 11 - 12 2566 64
          XM_008761610.1 XP_008759832.1 10 - 11 2902 64
          XM_008761611.1 XP_008759833.1 9 - 10 2696 64
          XM_008761612.1 XP_008759834.1 8 - 9 2630 64
          XM_008761613.1 XP_008759835.1 9 - 10 2691 64
          GenBank mRNA BC081779.1 - 11 - 12 1466 64
          FQ221890.1 - 3 - 4 315 64
          X94246.1 - 10 - 11 1349 64

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0300002637.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Pax8

          Gene Ontology Categories:

          Function(s) Process(es)

          urogenital system development
          metanephros development
          branching involved in ureteric bud morphogenesis
          kidney development
          mesonephros development
          mesenchymal to epithelial transition involved in metanephros morphogenesis
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          sulfur compound metabolic process
          central nervous system development
          cell differentiation
          thyroid gland development
          pronephric field specification
          inner ear morphogenesis
          regulation of apoptotic process
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          pronephros development
          cellular response to gonadotropin stimulus
          otic vesicle development
          positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis
          metanephric epithelium development
          metanephric distal convoluted tubule development
          metanephric comma-shaped body morphogenesis
          metanephric S-shaped body morphogenesis
          metanephric nephron tubule formation
          negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis
          regulation of metanephric nephron tubule epithelial cell differentiation
          positive regulation of branching involved in ureteric bud morphogenesis
          negative regulation of mesenchymal cell apoptotic process involved in metanephros development
          negative regulation of apoptotic process involved in metanephric collecting duct development
          negative regulation of apoptotic process involved in metanephric nephron tubule development
          positive regulation of metanephric DCT cell differentiation
          positive regulation of thyroid hormone generation
          regulation of thyroid-stimulating hormone secretion
          transcription cis-regulatory region binding
          RNA polymerase II cis-regulatory region sequence-specific DNA binding
          RNA polymerase II core promoter sequence-specific DNA binding
          DNA binding
          DNA-binding transcription factor activity
          protein binding
          sequence-specific DNA binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P105580 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 193014 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 328514 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 958671 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 398202 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 226347 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 143901 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 91854 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 885727 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 221340 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 318840 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 659536 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 189158 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 151281 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 908698 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 358116 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 829723 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 9418 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 550655 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 754730 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 625968 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 649337 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 136345 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 502343 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 662655 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 720739 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 916135 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 726561 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 501673 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 948633 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 440181 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 214124 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 636399 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 189404 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 697775 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 878625 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 647124 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 257095 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 952376 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 290330 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 341035 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 821428 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 682328 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 23101 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 23228 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 127859 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 42874 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 68529 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 144246 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 15792 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P105580 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P105580 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P105580 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P12538 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 86645 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 36496 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 105064 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 78780 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 18040 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10843228 - -
          Affymetrix Rat Gene 1.0 ST Array 10843227 - -
          Affymetrix Rat Gene 1.0 ST Array 10843219 - -
          Affymetrix Rat Gene 1.0 ST Array 10843222 - -
          Affymetrix Rat Gene 1.0 ST Array 10843224 - -
          Affymetrix Rat Gene 1.0 ST Array 10843217 - -
          Affymetrix Rat Gene 1.0 ST Array 10843221 - -
          Affymetrix Rat Gene 1.0 ST Array 10843218 - -
          Affymetrix Rat Gene 1.0 ST Array 10843225 - -
          Affymetrix Rat Gene 1.0 ST Array 10843226 - -
          Affymetrix Rat Gene 1.0 ST Array 10843223 - -
          Affymetrix Rat Gene 1.0 ST Array 10843220 - -
          Affymetrix Rat Gene 1.1 ST Array 10843216 - -
          Rat Genome 230 2.0 Array 1387730_at - -
          Rat Genome 230 2.0 Array 1378692_at - -
          Rat Genome 230 2.0 Array 1378692_PM_at - -
          Rat Genome 230 2.0 Array 1387730_PM_at - -
          Affymetrix HT Rat Focus Array 1387730_at - -
          Affymetrix HT Rat Focus Array 1378692_PM_at - -
          Affymetrix HT Rat Focus Array 1387730_PM_at - -
          Affymetrix HT Rat Focus Array 1378692_at - -
          Affymetrix Rat Clariom S Assay PSR0300019509.rn.1 TC0300002637.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0300019508.rn.1 TC0300002637.rn.1 RTA TC
          Rat Expression Set 230 1387730_PM_at - -
          Rat Expression Set 230 1387730_at - -
          Rat Expression Set 230 1378692_at - -
          Rat Expression Set 230 1378692_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10843216 - -
          Rat Genome U34 Set X94246_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21276015 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1351489 - -
          RatRef-12 Expression BeadChip ILMN_60428 - -

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          Host server : magellan-search-65cb46898d-nlgdw:80/100.66.128.131:80.
          git-commit: e5493f66f4597fc66e516c8a379ca3b6bed48f5b
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.33.0-2025.07.30-1.0