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          • › Search Tool
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          • › Rn00580546_m1
          See other PPP1CA GE Assays ›
          Gene Symbol:
          Ppp1ca
          Gene Name:
          protein phosphatase 1, catalytic subunit, alpha isozyme
          Gene Aliases:
          -
          Chromosome Location:
          Chr.1: 219439953 - 219443570 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00580546_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ppp1ca
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_031527.1 NP_113715.1 4 - 5 591 72
          GenBank mRNA BC070517.1 - 4 - 5 571 72
          D00859.1 - 4 - 5 591 72
          D90163.1 - 4 - 5 575 72
          FQ224860.1 - 4 - 5 581 72
          FQ231613.1 - 4 - 5 600 72
          FQ232496.1 - 4 - 5 599 72
          FQ233040.1 - 4 - 5 591 72
          FQ235125.1 - 4 - 5 591 72

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100003001.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Ppp1ca

          Gene Ontology Categories:

          Function(s) Process(es)

          glycogen metabolic process
          regulation of glycogen biosynthetic process
          regulation of glycogen catabolic process
          protein dephosphorylation
          lung development
          circadian regulation of gene expression
          regulation of circadian rhythm
          entrainment of circadian clock by photoperiod
          branching morphogenesis of an epithelial tube
          cell division
          positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
          phosphoprotein phosphatase activity
          protein serine/threonine phosphatase activity
          protein binding
          phosphatase activity
          ribonucleoprotein complex binding
          metal ion binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P259719 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 467430 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 788446 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 69033 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P259719 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P259719 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P259719 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P259719 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 81598 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10712849 - -
          Affymetrix Rat Gene 1.0 ST Array 10712852 - -
          Affymetrix Rat Gene 1.0 ST Array 10712851 - -
          Affymetrix Rat Gene 1.0 ST Array 10712848 - -
          Affymetrix Rat Gene 1.0 ST Array 10712850 - -
          Affymetrix Rat Gene 1.0 ST Array 10712847 - -
          Affymetrix Rat Gene 1.0 ST Array 10712846 - -
          Affymetrix Rat Gene 1.1 ST Array 10712845 - -
          Rat Genome 230 2.0 Array 1386863_PM_at - -
          Rat Genome 230 2.0 Array 1386863_at - -
          Affymetrix HT Rat Focus Array 1386863_PM_at - -
          Affymetrix HT Rat Focus Array 1386863_at - -
          Affymetrix Rat Clariom S Assay PSR0100024264.rn.1 TC0100003001.rn.1 RTA TC
          Rat Expression Set 230 1386863_at - -
          Rat Expression Set 230 1386863_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10712845 - -
          Rat Genome U34 Set S78215_s_at - -
          Rat Genome U34 Set rc_AA817897_s_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21594861 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1365456 - -
          RatRef-12 Expression BeadChip ILMN_51213 - -

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          git-commit: ab2b2261c2971e97b1ae408e3ad10520b8413932
          git-url: https://github.com/thermofisher/magellan-search
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