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          • › Search Tool
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          • › Rn00581820_m1
          See other PDZK1 GE Assays ›
          Gene Symbol:
          Pdzk1
          Gene Name:
          PDZ domain containing 1
          Gene Aliases:
          Clamp
          Chromosome Location:
          Chr.2: 198965685 - 198999323 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00581820_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Pdzk1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_031712.1 NP_113900.1 6 - 7 1061 61
          GenBank mRNA AF013145.1 - 6 - 7 1035 61
          AF116896.1 - 6 - 7 1061 61
          BC078788.1 - 6 - 7 1053 61

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0200001776.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Pdzk1

          Gene Ontology Categories:

          Function(s) Process(es)

          transport
          carnitine transport
          cholesterol transport
          positive regulation of ion transmembrane transport
          regulation of anion transport
          intracellular transport
          protein localization to plasma membrane
          positive regulation of protein targeting to membrane
          scavenger receptor binding
          protein binding
          PDZ domain binding
          protein-containing complex binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P222186 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 725707 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 911029 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 321750 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 466019 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 62248 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 812126 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 481996 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 368716 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 160914 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 971389 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 323543 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 847293 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 407100 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 844218 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 362382 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 463115 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 944297 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 437988 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 495397 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 675328 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 2830 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 160791 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 40449 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P222186 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P222186 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P222186 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P222186 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 73190 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 65798 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 97614 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 90187 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10817659 - -
          Affymetrix Rat Gene 1.0 ST Array 10817660 - -
          Affymetrix Rat Gene 1.0 ST Array 10817658 - -
          Affymetrix Rat Gene 1.0 ST Array 10817663 - -
          Affymetrix Rat Gene 1.0 ST Array 10817657 - -
          Affymetrix Rat Gene 1.0 ST Array 10817664 - -
          Affymetrix Rat Gene 1.0 ST Array 10817665 - -
          Affymetrix Rat Gene 1.0 ST Array 10817661 - -
          Affymetrix Rat Gene 1.0 ST Array 10817662 - -
          Affymetrix Rat Gene 1.1 ST Array 10817656 - -
          Rat Genome 230 2.0 Array 1368178_PM_at - -
          Rat Genome 230 2.0 Array 1368178_at - -
          Affymetrix HT Rat Focus Array 1368178_PM_at - -
          Affymetrix HT Rat Focus Array 1368178_at - -
          Affymetrix Rat Clariom S Assay PSR0200012124.rn.1 TC0200001776.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0200012122.rn.1 TC0200001776.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0200012125.rn.1 TC0200001776.rn.1 RTA TC
          Rat Expression Set 230 1368178_PM_at - -
          Rat Expression Set 230 1368178_at - -
          Affymetrix Rat Gene 1.0 ST Array 10817656 - -
          Rat Genome U34 Set AF013145_at - -
          Rat Genome U34 Set rc_AI232999_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21270725 - -
          Array Name Probe IDs Targets Target Type
          RatRef-12 Expression BeadChip ILMN_61185 - -

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          Host server : magellan-search-f85dfd666-px2hc:80/100.66.130.62:80.
          git-commit: 2ca7b3ab9a2195be9b417413331e4e963d93e17c
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