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- Gene Symbol:
-
Abcg1 - Gene Name:
- ATP-binding cassette, subfamily G (WHITE), member 1
- Gene Aliases:
- Abc8
- Chromosome Location:
- Chr.20: 9743269 - 9842735 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Abcg1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_053502.1 | NP_445954.1 | 5 - 6 | 664 | 71 | |
| XM_006256233.2 | XP_006256295.1 | 4 - 5 | 836 | 71 | ||
| GenBank mRNA | AJ303374.1 | - | 5 - 6 | 664 | 71 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC2000000353.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Transporter
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
regulation of transcription, DNA-templated
cholesterol metabolic process
response to organic substance
regulation of cholesterol esterification
positive regulation of cholesterol efflux
negative regulation of lipid storage
cholesterol transport
intracellular cholesterol transport
cholesterol efflux
phospholipid efflux
response to lipid
low-density lipoprotein particle remodeling
high-density lipoprotein particle remodeling
glycoprotein transport
cholesterol homeostasis
amyloid precursor protein catabolic process
reverse cholesterol transport
positive regulation of cholesterol biosynthetic process
phospholipid homeostasis
response to high density lipoprotein particle
toxin transport
ATP binding
phospholipid transporter activity
cholesterol transporter activity
toxin transporter activity
sterol-transporting ATPase activity
glycoprotein transporter activity
protein homodimerization activity
ADP binding
protein heterodimerization activity
regulation of transcription, DNA-templated
cholesterol metabolic process
response to organic substance
regulation of cholesterol esterification
positive regulation of cholesterol efflux
negative regulation of lipid storage
cholesterol transport
intracellular cholesterol transport
cholesterol efflux
phospholipid efflux
response to lipid
low-density lipoprotein particle remodeling
high-density lipoprotein particle remodeling
glycoprotein transport
cholesterol homeostasis
amyloid precursor protein catabolic process
reverse cholesterol transport
positive regulation of cholesterol biosynthetic process
phospholipid homeostasis
response to high density lipoprotein particle
toxin transport
ATP binding
phospholipid transporter activity
cholesterol transporter activity
toxin transporter activity
sterol-transporting ATPase activity
glycoprotein transporter activity
protein homodimerization activity
ADP binding
protein heterodimerization activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P237994 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 514590 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 368343 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 409004 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 65444 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 558476 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 933814 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 889976 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 625377 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 187950 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 196085 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 848857 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 702343 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 469071 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 348520 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 118044 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 455964 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 930679 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 19774 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 3399 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 423862 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 74780 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 448837 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 662845 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 754961 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 877318 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 840252 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 698633 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 835514 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 877619 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 829324 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 603542 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 198917 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 571089 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 397688 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 559267 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 390117 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 541303 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 874134 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 832028 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 241304 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 487282 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 179265 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 676412 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 168895 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 55906 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 20537 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 7064 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 152847 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 83265 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 107197 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P237994 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P237994 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P237994 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P237994 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 40588 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 7308 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 69164 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 5147 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 208 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10829086 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829097 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829083 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829094 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829091 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829095 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829093 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829087 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829089 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829098 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829088 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829084 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829096 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829090 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829085 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10829082 | - | - |
| Rat Genome 230 2.0 Array | 1373995_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1373995_at | - | - |
| Rat Genome 230 2.0 Array | 1387054_at | - | - |
| Rat Genome 230 2.0 Array | 1368103_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1387054_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1368103_at | - | - |
| Affymetrix HT Rat Focus Array | 1368103_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1373995_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1373995_at | - | - |
| Affymetrix HT Rat Focus Array | 1368103_at | - | - |
| Affymetrix HT Rat Focus Array | 1387054_at | - | - |
| Affymetrix HT Rat Focus Array | 1387054_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR2000003322.rn.1 | TC2000000353.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR2000003323.rn.1 | TC2000000353.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR2000003321.rn.1 | TC2000000353.rn.1 | RTA TC |
| Rat Expression Set 230 | 1387054_PM_at | - | - |
| Rat Expression Set 230 | 1373995_at | - | - |
| Rat Expression Set 230 | 1368103_PM_at | - | - |
| Rat Expression Set 230 | 1373995_PM_at | - | - |
| Rat Expression Set 230 | 1387054_at | - | - |
| Rat Expression Set 230 | 1368103_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10829082 | - | - |
| Rat Genome U34 Set | rc_AA944183_at | - | - |
| Rat Genome U34 Set | rc_AI179131_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 20823206 | - | - |
| ABI Rat Genome Survey Microarray | 21571311 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1354046 | - | - |
| RatRef-12 Expression BeadChip | ILMN_69533 | - | - |
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