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          • Home
          • › Search Tool
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          • › Rn01415600_m1
          See other FOXA2 GE Assays ›
          Gene Symbol:
          Foxa2
          Gene Name:
          forkhead box A2
          Gene Aliases:
          Hnf3b
          Chromosome Location:
          Chr.3: 142383093 - 142387493 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01415600_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Foxa2
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_012743.1 NP_036875.1 2 - 3 259 65
          XM_006235139.2 XP_006235201.1 1 - 2 134 65
          GenBank mRNA L09647.1 - 2 - 3 259 65

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0300001929.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 3' Most Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Foxa2

          Gene Ontology Categories:

          Function(s) Process(es)

          positive regulation of transcription from RNA polymerase II promoter by glucose
          carbon catabolite repression of transcription from RNA polymerase II promoter by glucose
          in utero embryonic development
          ectoderm formation
          cell fate specification
          chromatin organization
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          regulation of transcription by RNA polymerase II
          transcription by RNA polymerase II
          pattern specification process
          adult locomotory behavior
          anatomical structure morphogenesis
          anterior/posterior pattern specification
          dorsal/ventral pattern formation
          regulation of gene expression
          negative regulation of epithelial to mesenchymal transition
          regulation of lipid metabolic process
          regulation of steroid metabolic process
          cell differentiation in hindbrain
          dorsal/ventral neural tube patterning
          signal transduction involved in regulation of gene expression
          regulation of blood coagulation
          lung development
          endocrine pancreas development
          somite rostral/caudal axis specification
          response to insulin
          negative regulation of glucokinase activity
          positive regulation of embryonic development
          negative regulation of DNA-binding transcription factor activity
          negative regulation of neuron differentiation
          positive regulation of neuron differentiation
          positive regulation of smoothened signaling pathway
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          positive regulation of transcription by RNA polymerase III
          cell development
          anatomical structure formation involved in morphogenesis
          neuron fate specification
          epithelial tube branching involved in lung morphogenesis
          lung epithelial cell differentiation
          regulation of insulin secretion involved in cellular response to glucose stimulus
          connective tissue development
          dopaminergic neuron differentiation
          primitive streak formation
          positive regulation of gastrulation
          negative regulation of detection of glucose
          transcription cis-regulatory region binding
          RNA polymerase II cis-regulatory region sequence-specific DNA binding
          DNA-binding transcription factor activity, RNA polymerase II-specific
          DNA-binding transcription activator activity, RNA polymerase II-specific
          DNA binding
          double-stranded DNA binding
          DNA-binding transcription factor activity
          protein binding
          transcription factor binding
          kinase binding
          protein domain specific binding
          sequence-specific DNA binding
          SMAD binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P637279 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 95142 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 806063 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P637279 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P637279 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P637279 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P637279 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 47336 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10850524 - -
          Affymetrix Rat Gene 1.0 ST Array 10850522 - -
          Affymetrix Rat Gene 1.0 ST Array 10850523 - -
          Affymetrix Rat Gene 1.1 ST Array 10850521 - -
          Rat Genome 230 2.0 Array 1368711_at - -
          Rat Genome 230 2.0 Array 1368711_PM_at - -
          Affymetrix HT Rat Focus Array 1368711_PM_at - -
          Affymetrix HT Rat Focus Array 1368711_at - -
          Affymetrix Rat Clariom S Assay PSR0300013907.rn.1 TC0300001929.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0300013906.rn.1 TC0300001929.rn.1 RTA TC
          Rat Expression Set 230 1368711_PM_at - -
          Rat Expression Set 230 1368711_at - -
          Affymetrix Rat Gene 1.0 ST Array 10850521 - -
          Rat Genome U34 Set L09647_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21782750 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1530196 - -
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1376893 - -
          RatRef-12 Expression BeadChip ILMN_161603 - -

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