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          • › Search Tool
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          • › Rn01457527_g1
          See other MYOD1 GE Assays ›
          Gene Symbol:
          Myod1
          Gene Name:
          myogenic differentiation 1
          Gene Aliases:
          -
          Chromosome Location:
          Chr.1: 102396538 - 102399248 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01457527_g1
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Myod1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_176079.1 NP_788268.1 2 - 3 913 143
          GenBank mRNA BC127480.1 - 2 - 3 893 143

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100001523.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Mammalian Gene Collection Detect Genomic DNA Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Myod1

          Gene Ontology Categories:

          Function(s) Process(es)

          regulation of alternative mRNA splicing, via spliceosome
          transcription, DNA-templated
          regulation of transcription by RNA polymerase II
          transcription by RNA polymerase II
          muscle organ development
          myoblast fate determination
          skeletal muscle tissue development
          myoblast fusion
          cellular response to starvation
          skeletal muscle atrophy
          myotube differentiation
          myotube cell development
          myotube differentiation involved in skeletal muscle regeneration
          skeletal muscle cell differentiation
          response to muscle stretch
          skeletal muscle tissue regeneration
          positive regulation of skeletal muscle tissue regeneration
          regulation of RNA splicing
          skeletal muscle fiber adaptation
          histone H3 acetylation
          histone H4 acetylation
          myoblast differentiation
          positive regulation of myoblast differentiation
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          skeletal muscle fiber development
          positive regulation of skeletal muscle fiber development
          striated muscle cell differentiation
          positive regulation of muscle cell differentiation
          cellular response to glucocorticoid stimulus
          cellular response to estradiol stimulus
          cellular response to oxygen levels
          positive regulation of myoblast fusion
          negative regulation of myoblast proliferation
          RNA polymerase II transcription regulatory region sequence-specific DNA binding
          RNA polymerase II cis-regulatory region sequence-specific DNA binding
          DNA-binding transcription factor activity, RNA polymerase II-specific
          core promoter sequence-specific DNA binding
          DNA-binding transcription activator activity, RNA polymerase II-specific
          DNA binding
          chromatin binding
          DNA-binding transcription factor activity
          transcription factor binding
          enzyme binding
          chromatin DNA binding
          ubiquitin protein ligase binding
          sequence-specific DNA binding
          protein heterodimerization activity
          protein dimerization activity
          E-box binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P156262 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 48887 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 888525 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 192258 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P156262 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P156262 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P156262 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P156262 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 39155 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10707110 - -
          Affymetrix Rat Gene 1.0 ST Array 10707112 - -
          Affymetrix Rat Gene 1.0 ST Array 10707111 - -
          Affymetrix Rat Gene 1.1 ST Array 10707109 - -
          Rat Genome 230 2.0 Array 1398655_PM_at - -
          Rat Genome 230 2.0 Array 1398655_at - -
          Affymetrix HT Rat Focus Array 1398655_at - -
          Affymetrix HT Rat Focus Array 1398655_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0100012306.rn.1 TC0100001523.rn.1 RTA TC
          Rat Expression Set 230 1398655_at - -
          Rat Expression Set 230 1398655_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10707109 - -
          Rat Genome U34 Set M84176_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22328815 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1352310 - -
          RatRef-12 Expression BeadChip ILMN_60680 - -

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