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          • › Rn01764651_g1
          See other CCL21 GE Assays ›
          Gene Symbol:
          Ccl21
          Gene Name:
          chemokine (C-C motif) ligand 21
          Gene Aliases:
          Ccl21b
          Chromosome Location:
          Chr.5: 58197678 - 58198782 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01764651_g1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ccl21
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001008513.1 NP_001008513.1 3 - 4 408 74
          GenBank mRNA BC086571.1 - 3 - 4 408 74
          FQ218040.1 - 3 - 4 432 74
          FQ223815.1 - 3 - 4 434 74
          FQ225478.1 - 3 - 4 432 74
          FQ226079.1 - 3 - 4 430 74
          FQ233622.1 - 3 - 4 432 74

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0500002590.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus Rat Chemokine Panel 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Ccl21

          Gene Ontology Categories:

          Function(s) Process(es)

          establishment of T cell polarity
          positive regulation of cell-matrix adhesion
          dendritic cell chemotaxis
          immune response
          G protein-coupled receptor signaling pathway
          positive regulation of actin filament polymerization
          positive regulation of pseudopodium assembly
          ruffle organization
          positive regulation of cell adhesion mediated by integrin
          response to prostaglandin E
          mesangial cell-matrix adhesion
          positive regulation of I-kappaB kinase/NF-kappaB signaling
          positive regulation of phosphatidylinositol 3-kinase activity
          positive regulation of protein kinase activity
          positive regulation of JNK cascade
          release of sequestered calcium ion into cytosol
          positive regulation of filopodium assembly
          positive regulation of protein kinase B signaling
          cell chemotaxis
          positive regulation of ERK1 and ERK2 cascade
          positive regulation of neutrophil chemotaxis
          negative regulation of leukocyte tethering or rolling
          negative regulation of leukocyte apoptotic process
          positive regulation of cell motility
          positive regulation of T cell migration
          positive regulation of myeloid dendritic cell chemotaxis
          chemokine activity
          chemokine receptor binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P178252 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 317141 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P178252 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P178252 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P178252 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P178252 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10876211 - -
          Affymetrix Rat Gene 1.0 ST Array 10876209 - -
          Affymetrix Rat Gene 1.0 ST Array 10876212 - -
          Affymetrix Rat Gene 1.0 ST Array 10876210 - -
          Affymetrix Rat Gene 1.1 ST Array 10876208 - -
          Rat Genome 230 2.0 Array 1378015_at - -
          Rat Genome 230 2.0 Array 1378015_PM_at - -
          Affymetrix HT Rat Focus Array 1378015_PM_at - -
          Affymetrix HT Rat Focus Array 1378015_at - -
          Affymetrix Rat Clariom S Assay PSR0500019145.rn.1 TC0500002590.rn.1 RTA TC
          Rat Expression Set 230 1378015_PM_at - -
          Rat Expression Set 230 1378015_at - -
          Affymetrix Rat Gene 1.0 ST Array 10876208 - -
          Rat Genome U34 Set rc_AI012482_f_at - -
          Rat Genome U34 Set rc_AA998168_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21918474 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1357180 - -
          RatRef-12 Expression BeadChip ILMN_57800 - -

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          git-commit: 8ea1bebb48d33b8b7c0e2103582aa482e6db8664
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